RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 TLE1Q04724 770 aa12.45□□□□□ -0.42
VCAN-211ENST00000513984 DCTN5Q9BTE1 182 aa12.45□□□□□ -0.42
VCAN-211ENST00000513984 SLC25A32Q9H2D1 315 aa12.45□□□□□ -0.42
VCAN-211ENST00000513984 OR2S2Q9NQN1 319 aa12.45□□□□□ -0.42
VCAN-211ENST00000513984 MED9Q9NWA0 146 aa12.45□□□□□ -0.42
VCAN-211ENST00000513984 RCL1Q9Y2P8 373 aaKnown RBP12.45□□□□□ -0.42
VCAN-211ENST00000513984 CACNA1AO00555 2505 aa12.45□□□□□ -0.42
VCAN-211ENST00000513984 HCFC1P51610 2035 aa12.45□□□□□ -0.42
VCAN-211ENST00000513984 PKDREJQ9NTG1 2253 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.44□□□□□ -0.42
VCAN-211ENST00000513984 RNF212BA8MTL3 300 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 E7EQL1 145 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 SLC25A6P12236 298 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 TPT1P13693 172 aaKnown RBP12.44□□□□□ -0.42
VCAN-211ENST00000513984 PPP1CCP36873 323 aaKnown RBP12.44□□□□□ -0.42
VCAN-211ENST00000513984 EIF4EBP1Q13541 118 aaPredicted RBP12.44□□□□□ -0.42
VCAN-211ENST00000513984 COMMD7Q86VX2 200 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 FAM216AQ8WUB2 273 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 C14orf79Q96F83 325 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 GAFA1Q96PS6 74 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 OR2D2Q9H210 308 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 PLEKHF2Q9H8W4 249 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 NDRG3Q9UGV2 375 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 ADGRG4Q8IZF6 3080 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 CD3EP07766 207 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 NKX2-1P43699 371 aaPredicted RBP12.44□□□□□ -0.42
VCAN-211ENST00000513984 P2RY1P47900 373 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 SNTB1Q13884 538 aaKnown RBP12.44□□□□□ -0.42
VCAN-211ENST00000513984 THOC7Q6I9Y2 204 aaKnown RBP12.44□□□□□ -0.42
VCAN-211ENST00000513984 FAM53AQ6NSI3 398 aaPredicted RBP12.44□□□□□ -0.42
VCAN-211ENST00000513984 ZNF788Q6ZQV5 615 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 TGIF2LYQ8IUE0 185 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 BAP18Q8IXM2 172 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 GALNT11Q8NCW6 608 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 DMBX1Q8NFW5 382 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 C5orf30Q96GV9 206 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 EGLN1Q9GZT9 426 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 FAM234AQ9H0X4 552 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 C11orf1Q9H5F2 150 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 ZNF665Q9H7R5 613 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 OR6C3Q9NZP0 311 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 JPT1Q9UK76 154 aa12.44□□□□□ -0.42
VCAN-211ENST00000513984 LRRC30A6NM36 301 aa12.43□□□□□ -0.42
VCAN-211ENST00000513984 F2RL2O00254 374 aa12.43□□□□□ -0.42
VCAN-211ENST00000513984 IGKV1-39P01597 117 aa12.43□□□□□ -0.42
VCAN-211ENST00000513984 IGKV1D-39P04432 117 aa12.43□□□□□ -0.42
VCAN-211ENST00000513984 SELLP14151 372 aa12.43□□□□□ -0.42
VCAN-211ENST00000513984 LY6DQ14210 128 aa12.43□□□□□ -0.42
VCAN-211ENST00000513984 EFNB3Q15768 340 aa12.43□□□□□ -0.42
VCAN-211ENST00000513984 ZNF585BQ52M93 769 aa12.43□□□□□ -0.42
VCAN-211ENST00000513984 RFESDQ8TAC1 157 aa12.43□□□□□ -0.42
VCAN-211ENST00000513984 LSM10Q969L4 123 aaKnown RBP12.43□□□□□ -0.42
VCAN-211ENST00000513984 SAP30LQ9HAJ7 183 aa12.43□□□□□ -0.42
VCAN-211ENST00000513984 COL6A6A6NMZ7 2263 aa12.42□□□□□ -0.42
VCAN-211ENST00000513984 A0A0G2JRQ6 117 aa12.42□□□□□ -0.42
VCAN-211ENST00000513984 CGB3P0DN86 165 aa12.42□□□□□ -0.42
VCAN-211ENST00000513984 CGB7P0DN87 165 aa12.42□□□□□ -0.42
VCAN-211ENST00000513984 GRNP28799 593 aaKnown RBP12.42□□□□□ -0.42
VCAN-211ENST00000513984 EDDM3BP56851 147 aa12.42□□□□□ -0.42
VCAN-211ENST00000513984 GPR157Q5UAW9 335 aa12.42□□□□□ -0.42
VCAN-211ENST00000513984 PDZD9Q8IXQ8 264 aa12.42□□□□□ -0.42
VCAN-211ENST00000513984 ZCCHC24Q8N2G6 241 aaKnown RBP12.42□□□□□ -0.42
VCAN-211ENST00000513984 LINC01560Q8TB33 94 aa12.42□□□□□ -0.42
VCAN-211ENST00000513984 NEUROG1Q92886 237 aa12.42□□□□□ -0.42
VCAN-211ENST00000513984 LRRC46Q96FV0 321 aa12.42□□□□□ -0.42
VCAN-211ENST00000513984 CXorf58Q96LI9 332 aa12.42□□□□□ -0.42
VCAN-211ENST00000513984 ZC4H2Q9NQZ6 224 aa12.42□□□□□ -0.42
VCAN-211ENST00000513984 DCAF16Q9NXF7 216 aa12.42□□□□□ -0.42
VCAN-211ENST00000513984 IGHV3-43A0A0B4J1X8 118 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 A0A1B0GU03 582 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 A0A1B0GW55 424 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 SIGLEC5O15389 551 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 GPR137BO60478 399 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 PITX3O75364 302 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 GAPDHP04406 335 aaKnown RBP12.41□□□□□ -0.42
VCAN-211ENST00000513984 DUX4L2P0CJ85 424 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 DUX4L3P0CJ86 424 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 DUX4L4P0CJ87 422 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 DUX4L5P0CJ88 424 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 DUX4L6P0CJ89 424 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 DUX4L7P0CJ90 424 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 IGHV3-43DP0DP04 118 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 APOBEC3AP31941 199 aaPredicted RBP12.41□□□□□ -0.42
VCAN-211ENST00000513984 ID3Q02535 119 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 FAM74A1Q5RGS3 127 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 DUX4L9Q6RFH8 374 aaPredicted RBP12.41□□□□□ -0.42
VCAN-211ENST00000513984 DEFB108BQ8NET1 73 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 EDARADDQ8WWZ3 215 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 AGMATQ9BSE5 352 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 DUX4Q9UBX2 424 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 FBXL17Q9UF56 701 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 RNF150Q9ULK6 438 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 NBASA2RRP1 2371 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 ANKHD1Q8IWZ3 2542 aaKnown RBP12.41□□□□□ -0.42
VCAN-211ENST00000513984 MEX3AA1L020 520 aaKnown RBP12.41□□□□□ -0.42
VCAN-211ENST00000513984 LGALS8O00214 317 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 YPEL1O60688 119 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 GYPAP02724 150 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 TMEM33P57088 247 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 LOXL3P58215 753 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms