RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	SMIM4	Q8WVI0	70 aa		11.77	□□□□□ -0.53
MATR3-238	ENST00000512107	TRIM63	Q969Q1	353 aa		11.77	□□□□□ -0.53
MATR3-238	ENST00000512107	TOLLIP	Q9H0E2	274 aa		11.77	□□□□□ -0.53
MATR3-238	ENST00000512107	C11orf54	Q9H0W9	315 aa	Predicted RBP	11.77	□□□□□ -0.53
MATR3-238	ENST00000512107	IFI27L2	Q9H2X8	130 aa		11.77	□□□□□ -0.53
MATR3-238	ENST00000512107	SCPEP1	Q9HB40	452 aa		11.77	□□□□□ -0.53
MATR3-238	ENST00000512107	RDH8	Q9NYR8	311 aa		11.77	□□□□□ -0.53
MATR3-238	ENST00000512107	GNG12	Q9UBI6	72 aa		11.77	□□□□□ -0.53
MATR3-238	ENST00000512107	JPT1	Q9UK76	154 aa		11.77	□□□□□ -0.53
MATR3-238	ENST00000512107	hCG_1809904	A0A1W2PP81	198 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107		A0A1W2PPE2	198 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107		A0A1W2PR64	198 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107		A0A1W2PRV1	198 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	BUB1B-PAK6	H3BSN5	160 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	GABARAP	H6UMI1	98 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	YPEL1	O60688	119 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	TPPP	O94811	219 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	S100A5	P33763	92 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	OR3A3	P47888	321 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	LINC00205	P59089	165 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	FAAP20	Q6NZ36	180 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	LINC00311	Q8N616	119 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	ST6GALNAC6	Q969X2	333 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	YPEL2	Q96QA6	119 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	ZNF251	Q9BRH9	671 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	AGMAT	Q9BSE5	352 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	MMP28	Q9H239	520 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	IFT46	Q9NQC8	304 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	RNF150	Q9ULK6	438 aa		11.76	□□□□□ -0.53
MATR3-238	ENST00000512107	TUSC2	O75896	110 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	CD3D	P04234	171 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	ZNF735	P0CB33	412 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	SRD5A1	P18405	259 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	HRH1	P35367	487 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	KIR2DS4	P43632	304 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	CBX5	P45973	191 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	KIR2DS1	Q14954	304 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	CHRFAM7A	Q494W8	412 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	PLA1A	Q53H76	456 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	PYDC2	Q56P42	97 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	LY6G6F	Q5SQ64	297 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	SIGLECL1	Q8N7X8	197 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	BEND2	Q8NDZ0	799 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	OR5AP2	Q8NGF4	316 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	PIFO	Q8TCI5	191 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	FCAMR	Q8WWV6	532 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	ABHD14B	Q96IU4	210 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	ESM1	Q9NQ30	184 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	CDC42EP3	Q9UKI2	254 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	MGAT4A	Q9UM21	535 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	HILPDA	Q9Y5L2	63 aa		11.75	□□□□□ -0.53
MATR3-238	ENST00000512107	IGLV2-14	P01704	120 aa		11.74	□□□□□ -0.53
MATR3-238	ENST00000512107	AADAC	P22760	399 aa		11.74	□□□□□ -0.53
MATR3-238	ENST00000512107	RCVRN	P35243	200 aa		11.74	□□□□□ -0.53
MATR3-238	ENST00000512107	REG1B	P48304	166 aa		11.74	□□□□□ -0.53
MATR3-238	ENST00000512107	RAB13	P51153	203 aa		11.74	□□□□□ -0.53
MATR3-238	ENST00000512107	CDK10	Q15131	360 aa		11.74	□□□□□ -0.53
MATR3-238	ENST00000512107	MIDN	Q504T8	468 aa		11.74	□□□□□ -0.53
MATR3-238	ENST00000512107	RPL39P5	Q59GN2	51 aa		11.74	□□□□□ -0.53
MATR3-238	ENST00000512107	TPTE2P1	Q5T6R2	138 aa		11.74	□□□□□ -0.53
MATR3-238	ENST00000512107	STEAP3	Q658P3	488 aa		11.74	□□□□□ -0.53
MATR3-238	ENST00000512107	OVCH2	Q7RTZ1	564 aa		11.74	□□□□□ -0.53
MATR3-238	ENST00000512107	C8orf31	Q8N9H6	132 aa		11.74	□□□□□ -0.53
MATR3-238	ENST00000512107	MRGPRF	Q96AM1	343 aa		11.74	□□□□□ -0.53
MATR3-238	ENST00000512107	THAP7	Q9BT49	309 aa	Predicted RBP	11.74	□□□□□ -0.53
MATR3-238	ENST00000512107	ABHD14A	Q9BUJ0	271 aa		11.74	□□□□□ -0.53
MATR3-238	ENST00000512107	SAA2-SAA4	A0A096LPE2	208 aa		11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	ZNF736	B4DX44	427 aa	Predicted RBP	11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	TOR1A	O14656	332 aa		11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	RBBP9	O75884	186 aa		11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	CD74	P04233	296 aa		11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	SAA2	P0DJI9	122 aa	Predicted RBP	11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	OR5H8	P0DN80	308 aa		11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	ZBTB25	P24278	435 aa		11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	FCGR2C	P31995	323 aa		11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	KLF9	Q13886	244 aa	Predicted RBP	11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	SSX2	Q16385	188 aa		11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	LYG1	Q8N1E2	194 aa		11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	TMEM229B	Q8NBD8	167 aa		11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	TAF15	Q92804	592 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	GPHA2	Q96T91	129 aa		11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	PRDM13	Q9H4Q3	707 aa		11.73	□□□□□ -0.53
MATR3-238	ENST00000512107	DNHD1	Q96M86	4753 aa		11.73	□□□□□ -0.53
MATR3-238	ENST00000512107		A0A1W2PPI3	338 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	ANKRD20A5P	A0PJZ0	165 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	HSPA12A	O43301	675 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	OR8U9	P0C7N5	309 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	FAM157C	P0CG43	387 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	HNF1A	P20823	631 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	CD24	P25063	80 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	PTBP1	P26599	531 aa	Known RBP eCLIP	11.72	□□□□□ -0.53	2e-8	■■■□□ 16
MATR3-238	ENST00000512107	HTR1D	P28221	377 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	PRRX1	P54821	245 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	ARPC4	P59998	168 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	DYRK1A	Q13627	763 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	TMEM30B	Q3MIR4	351 aa		11.72	□□□□□ -0.53
MATR3-238	ENST00000512107	SPANXN2	Q5MJ10	180 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms