RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 NPFFR1Q9GZQ6 430 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 NTMQ9P121 344 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 EP300Q09472 2414 aaPredicted RBP9.49□□□□□ -0.89
CPNE4-209ENST00000512055 MTCL1Q9Y4B5 1905 aaKnown RBP9.49□□□□□ -0.89
CPNE4-209ENST00000512055 IGSF23A1L1A6 192 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 J3KRW8 73 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 SH2D1BO14796 132 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 MT-ND6P03923 174 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 NANOS3P60323 173 aaKnown RBP9.49□□□□□ -0.89
CPNE4-209ENST00000512055 A0A1W2PQD3 144 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 SHISA7A6NL88 538 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 CDX1P47902 265 aaPredicted RBP9.49□□□□□ -0.89
CPNE4-209ENST00000512055 RAB40CQ96S21 281 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 MARVELD1Q9BSK0 173 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 TMEM272A0A1B0GTI8 110 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 RRADP55042 308 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 CLDN18P56856 261 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 SPINK9Q5DT21 86 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 C9orf62Q8N4C0 152 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 ARRDC1Q8N5I2 433 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 RPS4Y2Q8TD47 263 aa9.49□□□□□ -0.89
CPNE4-209ENST00000512055 APOBEC4Q8WW27 367 aaKnown RBP9.49□□□□□ -0.89
CPNE4-209ENST00000512055 RSPO3Q9BXY4 272 aaPredicted RBP9.49□□□□□ -0.89
CPNE4-209ENST00000512055 COLQQ9Y215 455 aaPredicted RBP9.49□□□□□ -0.89
CPNE4-209ENST00000512055 C5orf49A4QMS7 147 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 LRRC30A6NM36 301 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 PAGE4O60829 102 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 BGLAPP02818 100 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 SP1P08047 785 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 OR10W1Q8NGF6 305 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 JKAMPQ9P055 326 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 ST6GALNAC2Q9UJ37 374 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 OR2W1Q9Y3N9 320 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 TMEM229AB2RXF0 380 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 CTAG2O75638 210 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 PATE4P0C8F1 98 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 ORM2P19652 201 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 FPR2P25090 351 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 HERPUD1Q15011 391 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 TMEM178AQ8NBL3 297 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 MISP3Q96FF7 219 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 RTL8AQ9BWD3 113 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 PGPEP1Q9NXJ5 209 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 CEP250Q9BV73 2442 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 HLA-DRB1P01911 266 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 PGA3P0DJD8 388 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 SSBP1Q04837 148 aaKnown RBP9.48□□□□□ -0.89
CPNE4-209ENST00000512055 TM4SF20Q53R12 229 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 PUSL1Q8N0Z8 303 aaKnown RBP9.48□□□□□ -0.89
CPNE4-209ENST00000512055 PLPPR2Q96GM1 343 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 C14orf144Q96I85 54 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 TMEM70Q9BUB7 260 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 R4GN57 208 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 SYNGR2O43760 224 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 HTN1P15515 57 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 IL11P20809 199 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 ACER2Q5QJU3 275 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 PDPNQ86YL7 162 aa9.48□□□□□ -0.89
CPNE4-209ENST00000512055 A1L4Q6 167 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 SNAI2O43623 268 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 WDR31Q8NA23 367 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 STXBP6Q8NFX7 210 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 OR2V1Q8NHB1 315 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 ASB10Q8WXI3 467 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 C9orf170A2RU37 121 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 LIPT2A6NK58 231 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 SPRY1O43609 319 aaPredicted RBP9.47□□□□□ -0.89
CPNE4-209ENST00000512055 SFT2D2O95562 160 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 FCGR2BP31994 310 aaPredicted RBP9.47□□□□□ -0.89
CPNE4-209ENST00000512055 PSG5Q15238 335 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 OR2Z1Q8NG97 314 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 VCX2Q9H322 139 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 RBKSQ9H477 322 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 GLRX2Q9NS18 164 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 CACFD1Q9UGQ2 172 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 CDC42EP3Q9UKI2 254 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 ST3GAL6Q9Y274 331 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 RAXQ9Y2V3 346 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 TCF20Q9UGU0 1960 aaKnown RBP9.47□□□□□ -0.89
CPNE4-209ENST00000512055 SRSF10O75494 262 aaKnown RBP9.47□□□□□ -0.89
CPNE4-209ENST00000512055 FOLR2P14207 255 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 LGALS3P17931 250 aaKnown RBP9.47□□□□□ -0.89
CPNE4-209ENST00000512055 WDR25Q64LD2 544 aaPredicted RBP9.47□□□□□ -0.89
CPNE4-209ENST00000512055 KCNE4Q8WWG9 221 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 COPS9Q8WXC6 57 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 CHODLQ9H9P2 273 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 RCC2Q9P258 522 aaKnown RBP9.47□□□□□ -0.89
CPNE4-209ENST00000512055 C7orf71A4D174 169 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 SFTPCP11686 197 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 DYNLT3P51808 116 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 TRA2AQ13595 282 aaKnown RBP eCLIP9.47□□□□□ -0.89
CPNE4-209ENST00000512055 C19orf54Q5BKX5 351 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 SHISA5Q8N114 240 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 PCGF1Q9BSM1 259 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 MTFP1Q9UDX5 166 aa9.47□□□□□ -0.89
CPNE4-209ENST00000512055 A0A1W2PR77 199 aa9.46□□□□□ -0.89
CPNE4-209ENST00000512055 TGFBR3LH3BV60 316 aa9.46□□□□□ -0.89
CPNE4-209ENST00000512055 ASAH2BP0C7U1 165 aa9.46□□□□□ -0.89
CPNE4-209ENST00000512055 GAGE2BQ13066 116 aa9.46□□□□□ -0.89
CPNE4-209ENST00000512055 GAGE2EQ4V326 116 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms