RNA–Protein interactions for RNA: ENST00000511496.5

LIMCH1-213, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-213ENST00000511496 TRAV9-2A0A087WT02 112 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 C11orf94C9JXX5 98 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 MPPED1O15442 326 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 S1PR2O95136 353 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 CTSEP14091 401 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 UCP1P25874 307 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 IL12BP29460 328 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 TGFBR3Q03167 851 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 KISS1Q15726 138 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 BVES-AS1Q5T3Y7 98 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 FAM216AQ8WUB2 273 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 GMPPAQ96IJ6 420 aaPredicted RBP10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 MBNL1Q9NR56 388 aaKnown RBP10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 LAMA2P24043 3122 aaKnown RBP10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 C17orf51A8MQB3 221 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 NAPSAO96009 420 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 SERPINE2P07093 398 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 PAX9P55771 341 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 SLC35B1P78383 322 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 CCL14Q16627 93 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 DEFB125Q8N687 156 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 OR2AE1Q8NHA4 323 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 TM2D1Q9BX74 207 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 ARL2-SNX15V9GYD0 113 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 SPACA6W5XKT8 324 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 THSD7AQ9UPZ6 1657 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 VENTXO95231 258 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 HLA-DOBP13765 273 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 AP1S3Q96PC3 154 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 APOOQ9BUR5 198 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 TMEM38BQ9NVV0 291 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 CD207Q9UJ71 328 aa10.32□□□□□ -0.76
LIMCH1-213ENST00000511496 DUSP11O75319 330 aaKnown RBP10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 ZNF324O75467 553 aaPredicted RBP10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 FCGR2AP12318 317 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 OTX1P32242 354 aaPredicted RBP10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 CA7P43166 264 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 PLP1P60201 277 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 ARL16Q0P5N6 197 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 CCL15Q16663 113 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 TMEM215Q68D42 235 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 SLC39A11Q8N1S5 342 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 C11orf40Q8WZ69 217 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 PIGTQ969N2 578 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 DDIT4LQ96D03 193 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 SIGMAR1Q99720 223 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 PEF1Q9UBV8 284 aaKnown RBP10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 TRPM6Q9BX84 2022 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 UBE2L5PA0A1B0GUS4 154 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 GUCA1AP43080 201 aaPredicted RBP10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 HTD2P86397 168 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 C17orf67Q0P5P2 114 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 Q0VG73 95 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 PDCD1Q15116 288 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 TBC1D26Q86UD7 250 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 ZNF439Q8NDP4 499 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 ZNF721Q8TF20 911 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 TMEM204Q9BSN7 226 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 DECR2Q9NUI1 292 aa10.31□□□□□ -0.76
LIMCH1-213ENST00000511496 IGKV1-9A0A0C4DH69 117 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 PEBP1P30086 187 aaKnown RBP10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 ID3Q02535 119 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 PMCHL1Q16048 86 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 OR10G8Q8NGN5 311 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 KCNS1Q96KK3 526 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 TMEM222Q9H0R3 208 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 SMPXQ9UHP9 88 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 PPIAL4EA0A075B759 164 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 IGKV1D-43A0A0B4J1Z2 117 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 PPIAL4CA0A0B4J2A2 164 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 C2orf72A6NCS6 295 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 PPIAL4DF5H284 164 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 PPIAL4FP0DN26 164 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 ANOS1P23352 680 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 LRRC61Q9BV99 259 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 REPIN1Q9BWE0 567 aaKnown RBP10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 GPR27Q9NS67 375 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 FAM231BA6NCW3 169 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 C17orf112F2Z3M2 114 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 ANGPTL7O43827 346 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 SERF2P84101 59 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 OR4C12Q96R67 309 aa10.3□□□□□ -0.76
LIMCH1-213ENST00000511496 WISP1O95388 367 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 GPR6P46095 362 aaPredicted RBP10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 NPBWR2P48146 333 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 FKBP1BP68106 108 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 TSTD1Q8NFU3 115 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 GUCD1Q96NT3 240 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 CHODLQ9H9P2 273 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 NPVFQ9HCQ7 196 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 OR51B2Q9Y5P1 312 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 LRP5LA4QPB2 252 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 RAMP3O60896 148 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 TNFSF15O95150 251 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 SRIP30626 198 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 NTSR1P30989 418 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 UQCRFS1P47985 274 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 UBALD2Q8IYN6 164 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 STPG3Q8N7X2 389 aa10.29□□□□□ -0.76
LIMCH1-213ENST00000511496 BCORP1Q8N888 145 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms