RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TRBV9A0A0B4J1U6 114 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 A6NDX4 124 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 VGLL3A8MV65 326 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 HACD1B0YJ81 288 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 KRTAP4-16G5E9R7 235 aaPredicted RBP2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 M0R3G1 203 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 SOX15O60248 233 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 HLA-HP01893 362 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 SMR3BP02814 79 aaPredicted RBP2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 C2P06681 752 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 NR2C1P13056 603 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 HPGDP15428 266 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 CSNK2A2P19784 350 aaPredicted RBP2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 PRPS1L1P21108 318 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 TUBG1P23258 451 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 SERPINB1P30740 379 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 CTRLP40313 264 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 NAA10P41227 235 aaPredicted RBP2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 GLP1RP43220 463 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 ZNF133P52736 654 aaPredicted RBP2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 ERVS71-1P61550 626 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 SARNPP82979 210 aaKnown RBP2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 ARFRP1Q13795 201 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 VAMP3Q15836 100 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 MRPL23Q16540 153 aaKnown RBP2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 ZNF829Q3KNS6 432 aaPredicted RBP2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 SPRNQ5BIV9 151 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 OR2G6Q5TZ20 316 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 OR52W1Q6IF63 320 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 REEP3Q6NUK4 255 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 SLC25A48Q6ZT89 311 aaKnown RBP2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 LYG2Q86SG7 212 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 CPNE9Q8IYJ1 553 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 RDH10Q8IZV5 341 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 TPRX1Q8N7U7 411 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 ASCC1Q8N9N2 400 aaKnown RBP2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 TMEM104Q8NE00 496 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 OR13C9Q8NGT0 318 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 PLPPR1Q8TBJ4 325 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 SUN5Q8TC36 379 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 CD300LFQ8TDQ1 290 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 PYROXD1Q8WU10 500 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 C17orf50Q8WW18 174 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 CMTM7Q96FZ5 175 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 ATP5SQ99766 215 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 C20orf85Q9H1P6 137 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 OR51B6Q9H340 312 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 SLC25A22Q9H936 323 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 TUBG2Q9NRH3 451 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 TAS2R9Q9NYW1 312 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 IFNKQ9P0W0 207 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 APLNQ9ULZ1 77 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 ASB4Q9Y574 426 aa2.28□□□□□ -2.04
TOPBP1-208ENST00000511439 A0A0A6YYD5 115 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 TMEM120BA0PK00 339 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 A6NIZ1 184 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 IGLL5B9A064 214 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 CCRL2O00421 344 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 HSD17B6O14756 317 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 RAB29O14966 203 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 EIF1BO60739 113 aaKnown RBP2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 NPIPB7O75200 414 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 CYB5R3P00387 301 aaPredicted RBP2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 PDYNP01213 254 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 SERPINE2P07093 398 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 UBCP0CG48 685 aaKnown RBP2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 P0DMU3 169 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 FAM231AP0DMU4 169 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 FAM231CP0DMU5 169 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 ATP6V1B2P21281 511 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 CCNOP22674 350 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 GGT2P36268 569 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 NDUFA8P51970 172 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 GPX6P59796 221 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 RAP1BP61224 184 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 SELENOTP62341 195 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 CRADDP78560 199 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 PRB3Q04118 309 aaPredicted RBP2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 SLAQ13239 276 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 KIR2DS1Q14954 304 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 KCNJ8Q15842 424 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 C1orf100Q5SVJ3 147 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 DEGS2Q6QHC5 323 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 LYPD2Q6UXB3 125 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 C19orf35Q6ZS72 473 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 MRPL21Q7Z2W9 205 aaKnown RBP2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 HDDC2Q7Z4H3 204 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 APRG1Q8IVJ8 170 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 RNF175Q8N4F7 328 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 JAGN1Q8N5M9 183 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 SUMF2Q8NBJ7 301 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 INO80EQ8NBZ0 244 aaPredicted RBP2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 OR2Z1Q8NG97 314 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 NDNFQ8TB73 568 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 PIFOQ8TCI5 191 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 ZNF675Q8TD23 568 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 CD200R1Q8TD46 325 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 CAPSLQ8WWF8 208 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 TMEM106AQ96A25 262 aa2.27□□□□□ -2.05
TOPBP1-208ENST00000511439 RPUSD4Q96CM3 377 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms