RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 RTN4IP1Q8WWV3 396 aaPredicted RBP11.16□□□□□ -0.62
DDX41-212ENST00000511040 ST6GALNAC6Q969X2 333 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 ABHD14AQ9BUJ0 271 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 PARP12Q9H0J9 701 aaKnown RBP11.16□□□□□ -0.62
DDX41-212ENST00000511040 SERTAD4Q9NUC0 356 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 OR1A1Q9P1Q5 309 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 METTL21EPA6NDL7 271 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 FAM90A9PA6NNJ1 464 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 ZNF736B4DX44 427 aaPredicted RBP11.15□□□□□ -0.62
DDX41-212ENST00000511040 MFNGO00587 321 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 AIREO43918 545 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 YPEL1O60688 119 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 AMY1AP04745 511 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 AMY2AP04746 511 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 SCTP09683 121 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 HIST1H1DP16402 221 aaKnown RBP11.15□□□□□ -0.62
DDX41-212ENST00000511040 TMEM11P17152 192 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 MRPS15P82914 257 aaKnown RBP11.15□□□□□ -0.62
DDX41-212ENST00000511040 Q3ZCU0 254 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 C9orf152Q5JTZ5 239 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 C16orf82Q7Z2V1 217 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 THNSL2Q86YJ6 484 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 TGIF2LXQ8IUE1 241 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 Q8N2B8 174 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 MAFIPQ8WZ33 124 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 YPEL2Q96QA6 119 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 SLC23A1Q9UHI7 598 aa11.15□□□□□ -0.62
DDX41-212ENST00000511040 ELF5Q9UKW6 265 aaPredicted RBP11.15□□□□□ -0.62
DDX41-212ENST00000511040 TRIM64CA6NLI5 447 aa11.14□□□□□ -0.63
DDX41-212ENST00000511040 ST8SIA5O15466 376 aa11.14□□□□□ -0.63
DDX41-212ENST00000511040 RGS11O94810 467 aa11.14□□□□□ -0.63
DDX41-212ENST00000511040 LPLP06858 475 aa11.14□□□□□ -0.63
DDX41-212ENST00000511040 SMIM18P0DKX4 95 aa11.14□□□□□ -0.63
DDX41-212ENST00000511040 VDAC2P45880 294 aaPredicted RBP11.14□□□□□ -0.63
DDX41-212ENST00000511040 OR3A3P47888 321 aa11.14□□□□□ -0.63
DDX41-212ENST00000511040 ARFRP1Q13795 201 aa11.14□□□□□ -0.63
DDX41-212ENST00000511040 STEAP3Q658P3 488 aa11.14□□□□□ -0.63
DDX41-212ENST00000511040 OR2AK2Q8NG84 335 aa11.14□□□□□ -0.63
DDX41-212ENST00000511040 OR5H6Q8NGV6 325 aa11.14□□□□□ -0.63
DDX41-212ENST00000511040 PTX4Q96A99 478 aa11.14□□□□□ -0.63
DDX41-212ENST00000511040 AKR1E2Q96JD6 320 aa11.14□□□□□ -0.63
DDX41-212ENST00000511040 ZNF230Q9UIE0 474 aaPredicted RBP11.14□□□□□ -0.63
DDX41-212ENST00000511040 MOB4Q9Y3A3 225 aa11.14□□□□□ -0.63
DDX41-212ENST00000511040 IGKV1-6A0A0C4DH72 117 aa11.13□□□□□ -0.63
DDX41-212ENST00000511040 TRDCB7Z8K6 153 aa11.13□□□□□ -0.63
DDX41-212ENST00000511040 HSPA12AO43301 675 aa11.13□□□□□ -0.63
DDX41-212ENST00000511040 LANCL1O43813 399 aa11.13□□□□□ -0.63
DDX41-212ENST00000511040 PEX14O75381 377 aa11.13□□□□□ -0.63
DDX41-212ENST00000511040 FCGR3AP08637 254 aa11.13□□□□□ -0.63
DDX41-212ENST00000511040 CEACAM6P40199 344 aa11.13□□□□□ -0.63
DDX41-212ENST00000511040 ZNF137PP52743 207 aa11.13□□□□□ -0.63
DDX41-212ENST00000511040 HERPUD1Q15011 391 aa11.13□□□□□ -0.63
DDX41-212ENST00000511040 TIMM50Q3ZCQ8 353 aa11.13□□□□□ -0.63
DDX41-212ENST00000511040 CDNFQ49AH0 187 aa11.13□□□□□ -0.63
DDX41-212ENST00000511040 ODF3L1Q8IXM7 274 aa11.13□□□□□ -0.63
DDX41-212ENST00000511040 EAF1Q96JC9 268 aaPredicted RBP11.13□□□□□ -0.63
DDX41-212ENST00000511040 MRPL20Q9BYC9 149 aaKnown RBP11.13□□□□□ -0.63
DDX41-212ENST00000511040 IFI27L2Q9H2X8 130 aa11.13□□□□□ -0.63
DDX41-212ENST00000511040 SAA2-SAA4A0A096LPE2 208 aa11.12□□□□□ -0.63
DDX41-212ENST00000511040 SAA2P0DJI9 122 aaPredicted RBP11.12□□□□□ -0.63
DDX41-212ENST00000511040 TALDO1P37837 337 aa11.12□□□□□ -0.63
DDX41-212ENST00000511040 RPS19P39019 145 aaKnown RBP11.12□□□□□ -0.63
DDX41-212ENST00000511040 PRR31Q5SQ13 230 aa11.12□□□□□ -0.63
DDX41-212ENST00000511040 C11orf88Q6PI97 169 aa11.12□□□□□ -0.63
DDX41-212ENST00000511040 IZUMO1Q8IYV9 350 aa11.12□□□□□ -0.63
DDX41-212ENST00000511040 DTX3Q8N9I9 347 aa11.12□□□□□ -0.63
DDX41-212ENST00000511040 FUNDC2Q9BWH2 189 aa11.12□□□□□ -0.63
DDX41-212ENST00000511040 RHBDL2Q9NX52 303 aa11.12□□□□□ -0.63
DDX41-212ENST00000511040 RNF150Q9ULK6 438 aa11.12□□□□□ -0.63
DDX41-212ENST00000511040 MGAT4AQ9UM21 535 aa11.12□□□□□ -0.63
DDX41-212ENST00000511040 TMEM235A6NFC5 223 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 NCBP2LA6PVI3 153 aaKnown RBP11.11□□□□□ -0.63
DDX41-212ENST00000511040 SERPINE3A8MV23 424 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 M0QZK8 103 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 FABP7O15540 132 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 GSTT2P0CG29 244 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 GSTT2BP0CG30 244 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 CD28P10747 220 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 ZBTB25P24278 435 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 CD1BP29016 333 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 NCS1P62166 190 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 LSAMPQ13449 338 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 RPL39P5Q59GN2 51 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 IGSF11Q5DX21 431 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 LY6G6FQ5SQ64 297 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 C5orf56Q8N8D9 126 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 OR2T10Q8NGZ9 312 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 SLC25A38Q96DW6 304 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 ABHD14BQ96IU4 210 aa11.11□□□□□ -0.63
DDX41-212ENST00000511040 C11orf54Q9H0W9 315 aaPredicted RBP11.11□□□□□ -0.63
DDX41-212ENST00000511040 IGKV1D-8A0A087WSZ0 117 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 M0QZ24 198 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 BET1O15155 118 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 TXNL1O43396 289 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 FBXO24O75426 580 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 TSPAN15O95858 294 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 MOSP00540 346 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 SERPINB10P48595 397 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 EBI3Q14213 229 aa11.1□□□□□ -0.63
DDX41-212ENST00000511040 ZNF833PQ6ZTB9 187 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms