RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ACKR3P25106 362 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 CEACAM3P40198 252 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 GPM6AP51674 278 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 CRYBA2P53672 197 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 TAS2R41P59536 307 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 GNG11P61952 73 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 KRR1Q13601 381 aaKnown RBP4.31□□□□□ -1.72
USP53-206ENST00000510737 EBI3Q14213 229 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 HLA-DRB5Q30154 266 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 CCDC80Q76M96 950 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 TGIF2LXQ8IUE1 241 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 BATF2Q8N1L9 274 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 C17orf53Q8N3J3 647 aaPredicted RBP4.31□□□□□ -1.72
USP53-206ENST00000510737 TCEANCQ8N8B7 351 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 OR52L1Q8NGH7 329 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 TRMT10AQ8TBZ6 339 aaKnown RBP4.31□□□□□ -1.72
USP53-206ENST00000510737 IFT81Q8WYA0 676 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 PIGCQ92535 297 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 TAMM41Q96BW9 452 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 CHCHD6Q9BRQ6 235 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 TSPYL1Q9H0U9 437 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 WFDC10AQ9H1F0 79 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 RABEP2Q9H5N1 569 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 MRPL22Q9NWU5 206 aaKnown RBP4.31□□□□□ -1.72
USP53-206ENST00000510737 hADV38S2A0JD32 116 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 EFCAB9A8MZ26 197 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 G3V318 75 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 SDHDO14521 159 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 CDC42EP2O14613 210 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 TOR1AO14656 332 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 SERPINA1P01009 418 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 HSPB1P04792 205 aaKnown RBP4.3□□□□□ -1.72
USP53-206ENST00000510737 GIG44P09565 113 aaPredicted RBP4.3□□□□□ -1.72
USP53-206ENST00000510737 CD34P28906 385 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 CRABP1P29762 137 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 GPR4P46093 362 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 RPL14P50914 215 aaKnown RBP4.3□□□□□ -1.72
USP53-206ENST00000510737 SLC7A2P52569 658 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 ERVK-16P61578 105 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 PRKCDQ05655 676 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 OPCMLQ14982 345 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 ANKDD1AQ495B1 522 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 PRAMEF5Q5TYX0 476 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 HAGHLQ6PII5 290 aaPredicted RBP4.3□□□□□ -1.72
USP53-206ENST00000510737 MSANTD1Q6ZTZ1 278 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 GDPD3Q7L5L3 318 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 NRMQ8IXM6 262 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 Q8N6K4 173 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 OR9I1Q8NGQ6 314 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 CREB3L1Q96BA8 519 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 C18orf15Q96N68 181 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 FMO2Q99518 471 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 SRD5A3Q9H8P0 318 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 VAPAQ9P0L0 249 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 SLC22A13Q9Y226 551 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 SH3GLB1Q9Y371 365 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 IER3IP1Q9Y5U9 82 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 GMEB1Q9Y692 573 aa4.3□□□□□ -1.72
USP53-206ENST00000510737 FAM183AA6NL82 134 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 OR11H12B2RN74 326 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 NOS1APO75052 506 aaPredicted RBP4.29□□□□□ -1.72
USP53-206ENST00000510737 SHBGP04278 402 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 BPGMP07738 259 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 TROVE2P10155 538 aaKnown RBP eCLIP4.29□□□□□ -1.72
USP53-206ENST00000510737 CDK2P24941 298 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 POLR2JP52435 117 aaKnown RBP4.29□□□□□ -1.72
USP53-206ENST00000510737 PRRX1P54821 245 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 GNG3P63215 75 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 EIF2B1Q14232 305 aaKnown RBP4.29□□□□□ -1.72
USP53-206ENST00000510737 EDDM3AQ14507 147 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 SLC36A3Q495N2 470 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 ZBED5Q49AG3 693 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 RSBN1Q5VWQ0 802 aaPredicted RBP4.29□□□□□ -1.72
USP53-206ENST00000510737 OR52W1Q6IF63 320 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 TBPL2Q6SJ96 375 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 HEPN1Q6WQI6 88 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 ZDHHC21Q8IVQ6 265 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 TIGD4Q8IY51 512 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 ASCC1Q8N9N2 400 aaKnown RBP4.29□□□□□ -1.72
USP53-206ENST00000510737 CASTOR1Q8WTX7 329 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 SORT1Q99523 831 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 NSRP1Q9H0G5 558 aaKnown RBP4.29□□□□□ -1.72
USP53-206ENST00000510737 HES4Q9HCC6 221 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 CENPMQ9NSP4 180 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 CHCHD3Q9NX63 227 aaKnown RBP4.29□□□□□ -1.72
USP53-206ENST00000510737 LINC00312Q9Y6C7 94 aa4.29□□□□□ -1.72
USP53-206ENST00000510737 IGHV3-72A0A0B4J1Y9 119 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 F8VVB4 439 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 F8VWA3 439 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 ZSCAN12O43309 604 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 SOX15O60248 233 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 MPZL2O60487 215 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 SPAG7O75391 227 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 TXNDC12O95881 172 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 CSN3P07498 182 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 LGALS1P09382 135 aaKnown RBP4.28□□□□□ -1.72
USP53-206ENST00000510737 TCTAP57738 103 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 FXYD6P3P58550 94 aa4.28□□□□□ -1.72
USP53-206ENST00000510737 ABCE1P61221 599 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms