RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 NUBP2Q9Y5Y2 271 aa12.26□□□□□ -0.45
RAB40C-202ENST00000509637 SPINT2O43291 252 aa12.25□□□□□ -0.45
RAB40C-202ENST00000509637 TXNL1O43396 289 aa12.25□□□□□ -0.45
RAB40C-202ENST00000509637 PROP1O75360 226 aa12.25□□□□□ -0.45
RAB40C-202ENST00000509637 CIB2O75838 187 aa12.25□□□□□ -0.45
RAB40C-202ENST00000509637 ATP5HO75947 161 aa12.25□□□□□ -0.45
RAB40C-202ENST00000509637 GP9P14770 177 aa12.25□□□□□ -0.45
RAB40C-202ENST00000509637 RASSF2P50749 326 aa12.25□□□□□ -0.45
RAB40C-202ENST00000509637 INSL3P51460 131 aa12.25□□□□□ -0.45
RAB40C-202ENST00000509637 PPP3R1P63098 170 aa12.25□□□□□ -0.45
RAB40C-202ENST00000509637 ACSM6Q6P461 480 aa12.25□□□□□ -0.45
RAB40C-202ENST00000509637 ARPC1AQ92747 370 aa12.25□□□□□ -0.45
RAB40C-202ENST00000509637 SELENOIQ9C0D9 397 aa12.25□□□□□ -0.45
RAB40C-202ENST00000509637 IFI27L2Q9H2X8 130 aa12.25□□□□□ -0.45
RAB40C-202ENST00000509637 SAA2-SAA4A0A096LPE2 208 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 NBR2O15453 112 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 BAG2O95816 211 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 SAA2P0DJI9 122 aaPredicted RBP12.24□□□□□ -0.45
RAB40C-202ENST00000509637 MGMTP16455 207 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 FSTP19883 344 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 CRIP2P52943 208 aaPredicted RBP12.24□□□□□ -0.45
RAB40C-202ENST00000509637 LINC00205P59089 165 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 CX3CL1P78423 397 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 LRRC36Q1X8D7 754 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 ZFAND6Q6FIF0 208 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 OR10K2Q6IF99 312 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 LAIR2Q6ISS4 152 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 LIN54Q6MZP7 749 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 GLDNQ6ZMI3 551 aaPredicted RBP12.24□□□□□ -0.45
RAB40C-202ENST00000509637 ZNF429Q86V71 674 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 STX19Q8N4C7 294 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 OR14A2Q96R54 314 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 SULT4A1Q9BR01 284 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 CHCHD6Q9BRQ6 235 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 ABHD14AQ9BUJ0 271 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 FBXL15Q9H469 300 aa12.24□□□□□ -0.45
RAB40C-202ENST00000509637 PAK1IP1Q9NWT1 392 aaPredicted RBP12.24□□□□□ -0.45
RAB40C-202ENST00000509637 LCE6AA0A183 80 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 YPEL1O60688 119 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 ZNF780AO75290 641 aaPredicted RBP12.23□□□□□ -0.45
RAB40C-202ENST00000509637 SAP30O75446 220 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 IGHV3-11P01762 117 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 MAS1P04201 325 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 CT45A6P0DMU7 189 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 CT45A5P0DMU8 189 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 CT45A7P0DMV0 189 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 OR5H8P0DN80 308 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 FUT3P21217 361 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 DCKP27707 260 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 INSL4Q14641 139 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 ECSCRQ19T08 205 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 Q499Y3 187 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 RPL39P5Q59GN2 51 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 C6orf183Q5T699 404 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 TMEM65Q6PI78 240 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 JAGN1Q8N5M9 183 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 YPEL2Q96QA6 119 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 S100A13Q99584 98 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 FAM103A1Q9BTL3 118 aaKnown RBP12.23□□□□□ -0.45
RAB40C-202ENST00000509637 KCNK15Q9H427 330 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 EDA2RQ9HAV5 297 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 CSMD3Q7Z407 3707 aa12.23□□□□□ -0.45
RAB40C-202ENST00000509637 LYSTQ99698 3801 aa12.22□□□□□ -0.45
RAB40C-202ENST00000509637 PNMA8CA0A1B0GUJ8 204 aa12.22□□□□□ -0.45
RAB40C-202ENST00000509637 A0A1W2PN81 502 aa12.22□□□□□ -0.45
RAB40C-202ENST00000509637 ST8SIA5O15466 376 aa12.22□□□□□ -0.45
RAB40C-202ENST00000509637 CHRNA7P36544 502 aa12.22□□□□□ -0.45
RAB40C-202ENST00000509637 HMGN3Q15651 99 aa12.22□□□□□ -0.45
RAB40C-202ENST00000509637 FAM131AQ6UXB0 335 aa12.22□□□□□ -0.45
RAB40C-202ENST00000509637 FAM46BQ96A09 425 aa12.22□□□□□ -0.45
RAB40C-202ENST00000509637 MRPS24Q96EL2 167 aaKnown RBP12.22□□□□□ -0.45
RAB40C-202ENST00000509637 DERL3Q96Q80 235 aa12.22□□□□□ -0.45
RAB40C-202ENST00000509637 CITED4Q96RK1 184 aa12.22□□□□□ -0.45
RAB40C-202ENST00000509637 MYCBPQ99417 103 aaPredicted RBP12.22□□□□□ -0.45
RAB40C-202ENST00000509637 TM2D3Q9BRN9 247 aa12.22□□□□□ -0.45
RAB40C-202ENST00000509637 C19orf73Q9NVV2 129 aa12.22□□□□□ -0.45
RAB40C-202ENST00000509637 JPT1Q9UK76 154 aa12.22□□□□□ -0.45
RAB40C-202ENST00000509637 DIMT1Q9UNQ2 313 aaKnown RBP12.22□□□□□ -0.45
RAB40C-202ENST00000509637 HYDINQ4G0P3 5121 aa12.22□□□□□ -0.45
RAB40C-202ENST00000509637 TNCP24821 2201 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 LINC01619G3V211 115 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 LGALS1P09382 135 aaKnown RBP12.21□□□□□ -0.45
RAB40C-202ENST00000509637 LYL1P12980 280 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 SSBP2P81877 361 aaPredicted RBP12.21□□□□□ -0.45
RAB40C-202ENST00000509637 HTD2P86397 168 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 GABPB1Q06547 395 aaPredicted RBP12.21□□□□□ -0.45
RAB40C-202ENST00000509637 GPR176Q14439 515 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 TMEM30BQ3MIR4 351 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 LY6G6FQ5SQ64 297 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 FAM27D1Q5T7N8 215 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 AWAT2Q6E213 333 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 GGHQ92820 318 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 RHOVQ96L33 236 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 MS4A10Q96PG2 267 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 FAAP24Q9BTP7 215 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 C9orf16Q9BUW7 83 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 SPACA1Q9HBV2 294 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 S100A14Q9HCY8 104 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 A3GALT2U3KPV4 340 aa12.21□□□□□ -0.45
RAB40C-202ENST00000509637 FAM90A7PA6NKC0 464 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms