RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 RND3P61587 244 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 C5orf30Q96GV9 206 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 PIGMQ9H3S5 423 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 TAS2R3Q9NYW6 316 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 PSG11Q9UQ72 335 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 NSG2Q9Y328 171 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 RFNGQ9Y644 331 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 ANKHD1Q8IWZ3 2542 aaKnown RBP12.43□□□□□ -0.42
PHF3-209ENST00000509330 A0A1W2PPE3 182 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 OOEPA6NGQ2 149 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 CST7O76096 145 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 IGKV1-39P01597 117 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 IGKV1D-39P04432 117 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 ID4P47928 161 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 RBPJQ06330 500 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 SHEQ5VZ18 495 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 SLC35E4Q6ICL7 350 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 Q6ZRM9 215 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 LINC01560Q8TB33 94 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 SLC25A32Q9H2D1 315 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 ZNF835Q9Y2P0 537 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 ZNF737O75373 536 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 GYPAP02724 150 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 HSD17B11Q8NBQ5 300 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 LRRC20Q8TCA0 184 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 GPR146Q96CH1 333 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 CCL13Q99616 98 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 WFDC1Q9HC57 220 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 DSCAMO60469 2012 aa12.43□□□□□ -0.42
PHF3-209ENST00000509330 ZNF705EA8MWA4 302 aaPredicted RBP12.42□□□□□ -0.42
PHF3-209ENST00000509330 VDAC1P21796 283 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 RPS23P62266 143 aaKnown RBP12.42□□□□□ -0.42
PHF3-209ENST00000509330 RPL30P62888 115 aaKnown RBP12.42□□□□□ -0.42
PHF3-209ENST00000509330 SRPXP78539 464 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 MZT1Q08AG7 82 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 LY6DQ14210 128 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 ADIPOQQ15848 244 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 FAM216BQ8N7L0 139 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 WRBO00258 174 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 AGPAT2O15120 278 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 ERVFRD-1P60508 538 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 NMSQ5H8A3 153 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 GNG12Q9UBI6 72 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 CACNG5Q9UF02 275 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 POMT1Q9Y6A1 747 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 A0A1B0GV50 99 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 TMEM50AO95807 157 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 ACAA1P09110 424 aaPredicted RBP12.42□□□□□ -0.42
PHF3-209ENST00000509330 IAPPP10997 89 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 Q3ZCU0 254 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 FAM90A1Q86YD7 464 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 STPG2Q8N412 459 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 OR5D13Q8NGL4 314 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 MS4A7Q9GZW8 240 aaPredicted RBP12.42□□□□□ -0.42
PHF3-209ENST00000509330 HRH4Q9H3N8 390 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 TMEM231Q9H6L2 316 aa12.42□□□□□ -0.42
PHF3-209ENST00000509330 DCHS2Q6V1P9 2916 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 ODAMA1E959 279 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 TUBAL3A6NHL2 446 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 KRASP01116 189 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 PTAFRP25105 342 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 CCDC28AQ8IWP9 274 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 STOML3Q8TAV4 291 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 SH3BGRL3Q9H299 93 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 BARX1Q9HBU1 254 aaPredicted RBP12.41□□□□□ -0.42
PHF3-209ENST00000509330 CHST1O43916 411 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 VAMP2P63027 116 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 CDSNQ15517 529 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 ZNF585BQ52M93 769 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 C1orf174Q8IYL3 243 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 PRR7Q8TB68 274 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 NARFLQ9H6Q4 476 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 ELOVL5Q9NYP7 299 aa12.41□□□□□ -0.42
PHF3-209ENST00000509330 IGSF23A1L1A6 192 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 IFNL4K9M1U5 179 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 CCL21O00585 134 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 C1QL1O75973 258 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 IGKV1-5P01602 117 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 TCTEX1D2Q8WW35 142 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 PLA2G2EQ9NZK7 142 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 RNF7Q9UBF6 113 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 MED6O75586 246 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 G6PCP35575 357 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 EWSR1Q01844 656 aaKnown RBP eCLIP12.4□□□□□ -0.42
PHF3-209ENST00000509330 OR2C3Q8N628 320 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 CCL17Q92583 94 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 PHYHIPLQ96FC7 376 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 SPIN2AQ99865 258 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 SPIN2BQ9BPZ2 258 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 PLEKHF2Q9H8W4 249 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 SESN1Q9Y6P5 492 aa12.4□□□□□ -0.42
PHF3-209ENST00000509330 TACC2O95359 2948 aa12.4□□□□□ -0.43
PHF3-209ENST00000509330 NPIPB11E5RHQ5 1161 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 SPINT2O43291 252 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 PLAUP00749 431 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 LPAR6P43657 344 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 FHITP49789 147 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 TLE1Q04724 770 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 TUSC1Q2TAM9 212 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 SPTAN1Q13813 2472 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms