RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 KRTAP4-5Q9BYR2 181 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 BARHL1Q9BZE3 327 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 CST11Q9H112 138 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 MMP28Q9H239 520 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 IFI27L2Q9H2X8 130 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 HEXA-AS1Q9H8Q6 139 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 PLGRKTQ9HBL7 147 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 OR6C3Q9NZP0 311 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 OR1A1Q9P1Q5 309 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 GHRLQ9UBU3 117 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 GLS2Q9UI32 602 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 HILPDAQ9Y5L2 63 aa5.76□□□□□ -1.49
TOPBP1-207ENST00000509162 TRBV6-6A0A0A6YYG2 114 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 LOC100506127A0A0U1RQW1 187 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 A0A1W2PPH5 198 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 FAM90A9PA6NNJ1 464 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 ZNF736B4DX44 427 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 BUB1B-PAK6H3BSN5 160 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 TIMM23O14925 209 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 SSX5O60225 188 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 PROP1O75360 226 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 GABARAPO95166 117 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 TFAP2AP05549 437 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 CD3GP09693 182 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 PTHLHP12272 177 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 ARSBP15848 533 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 MYL9P24844 172 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 BLVRBP30043 206 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 PPP1CCP36873 323 aaKnown RBP5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 REG1BP48304 166 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 ZNF137PP52743 207 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 LSM3P62310 102 aaKnown RBP5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 GPR176Q14439 515 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 FAM189A2Q15884 450 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 AANATQ16613 207 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 CT45A1Q5HYN5 189 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 MINOS1Q5TGZ0 78 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 RBMS3Q6XE24 437 aaKnown RBP5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 Q8N6K4 173 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 OR9G1Q8NH87 305 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 CT45A3Q8NHU0 189 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 KCNG3Q8TAE7 436 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 NEK7Q8TDX7 302 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 GCDHQ92947 438 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 ARL11Q969Q4 196 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 ZNF251Q9BRH9 671 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 SLITRK2Q9H156 845 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 TAF9BQ9HBM6 251 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 SERTAD4Q9NUC0 356 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 C19orf73Q9NVV2 129 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 MINOS1-NBL1R4GNA1 71 aa5.75□□□□□ -1.49
TOPBP1-207ENST00000509162 A0A087WXM4 84 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 IGHV3-72A0A0B4J1Y9 119 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 MCRIP1C9JLW8 97 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 SDCBPO00560 298 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 ORC5O43913 435 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 TSPAN9O75954 239 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 GLAP06280 429 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 FCGR3AP08637 254 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 SCTP09683 121 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 HIST1H1DP16402 221 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 GNB3P16520 340 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 HTR1DP28221 377 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 DYNLT3P51808 116 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 HLA-DRB3P79483 266 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 CTF1Q16619 201 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 C10orf99Q6UWK7 81 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 SLC25A48Q6ZT89 311 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 Q8N2B8 174 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 LINC00311Q8N616 119 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 DRAM1Q8N682 238 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 OR56B4Q8NH76 319 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 NDNFQ8TB73 568 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 MALSU1Q96EH3 234 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 S100A13Q99584 98 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 FUNDC2Q9BWH2 189 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 C16orf95Q9H693 158 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 SPACA1Q9HBV2 294 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 Q9N2K0 584 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 DPM3Q9P2X0 92 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 DAPK2Q9UIK4 370 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 HSF4Q9ULV5 492 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 FAM96BQ9Y3D0 163 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 MMP24Q9Y5R2 645 aa5.74□□□□□ -1.49
TOPBP1-207ENST00000509162 FUOMA2VDF0 154 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 TMEM235A6NFC5 223 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 HSD17B6O14756 317 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 SNRNP70P08621 437 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 RPS19P39019 145 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 OR3A3P47888 321 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 LINC00205P59089 165 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 VBP1P61758 197 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 BLCAPP62952 87 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 ZNF816Q0VGE8 651 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 RBM39Q14498 530 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 DHRS7BQ6IAN0 325 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 C8orf31Q8N9H6 132 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 OR10A7Q8NGE5 316 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 OR52M1Q8NGK5 317 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 OR10R2Q8NGX6 335 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms