RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 CXCL3P19876 107 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 AKR1C2P52895 323 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 PSG4Q00888 419 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 AKR1C1Q04828 323 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF404Q494X3 552 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 CLEC19AQ6UXS0 136 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 OR8J3Q8NGG0 315 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 LHFPL5Q8TAF8 219 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 SYNPRQ8TBG9 265 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 CNRIP1Q96F85 164 aaPredicted RBP3.32□□□□□ -1.88
NEDD4-209ENST00000508871 DERL3Q96Q80 235 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 MGLLQ99685 303 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 FAM173AQ9BQD7 235 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 METTL17Q9H7H0 456 aaPredicted RBP3.32□□□□□ -1.88
NEDD4-209ENST00000508871 PLA2G2DQ9UNK4 145 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 TNRC6BQ9UPQ9 1833 aaKnown RBP3.31□□□□□ -1.88
NEDD4-209ENST00000508871 LOC101059948A0A1B0GTJ6 334 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 PQLC2LA1A4F0 135 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 OR11H12B2RN74 326 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 CLDN34H7C241 214 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 KIR2DS3K7RE56 304 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 UBFD1O14562 309 aaKnown RBP3.31□□□□□ -1.88
NEDD4-209ENST00000508871 LALBAP00709 142 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 HOXD4P09016 255 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-209ENST00000508871 CT45A6P0DMU7 189 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 CT45A5P0DMU8 189 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 CT45A7P0DMV0 189 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 UBE2AP49459 152 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 RPS21P63220 83 aaKnown RBP3.31□□□□□ -1.88
NEDD4-209ENST00000508871 KIR2DS3Q14952 304 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 CT45A1Q5HYN5 189 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 SPANXN4Q5MJ08 99 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 TSPO2Q5TGU0 170 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 PIANPQ8IYJ0 282 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 OR11H1Q8NG94 326 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 OR11H2Q8NH07 326 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 CT45A3Q8NHU0 189 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 CCDC115Q96NT0 180 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 GFI1Q99684 422 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 PRSS16Q9NQE7 514 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 ACER3Q9NUN7 267 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 SLC35A3Q9Y2D2 325 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 NUBP2Q9Y5Y2 271 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 TP53BP1Q12888 1972 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-209ENST00000508871 SMIM26A0A096LP01 95 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 KIR2DS5A0A0G2JLQ3 304 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 A0A0G2JNG1 304 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 A0A1W2PP18 115 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 FAM220BPB1ANY3 271 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 RRHO14718 337 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 OR1I1O60431 355 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 FZD7O75084 574 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 IFI6P09912 130 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 IL1RNP18510 177 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 FOXF2Q12947 444 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 SRSF9Q13242 221 aaKnown RBP eCLIP3.31□□□□□ -1.88
NEDD4-209ENST00000508871 KIR2DS5Q14953 304 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 C2orf73Q8N5S3 287 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-209ENST00000508871 OR1M1Q8NGA1 313 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 OR52N5Q8NH56 324 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 GATAD1Q8WUU5 269 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 UBE2E2Q96LR5 201 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 HDHD3Q9BSH5 251 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-209ENST00000508871 DCSTAMPQ9H295 470 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 NUP205Q92621 2012 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 NUP210LQ5VU65 1888 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 A0A0U1RQV1 116 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF846Q147U1 533 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 PSG5Q15238 335 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 TMEM179BQ7Z7N9 219 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF614Q8N883 585 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF114Q8NC26 417 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 OR5A1Q8NGJ0 315 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 OR51A4Q8NGJ6 313 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 SLC25A40Q8TBP6 338 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 RPUSD4Q96CM3 377 aaKnown RBP3.31□□□□□ -1.88
NEDD4-209ENST00000508871 CSTL1Q9H114 145 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 LPAR5Q9H1C0 372 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 CACNG5Q9UF02 275 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 MOB4Q9Y3A3 225 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 COL5A1P20908 1838 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-209ENST00000508871 PIAS1O75925 651 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 SNCGO76070 127 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 TOXO94900 526 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 TMEM33P57088 247 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 RPL32P62910 135 aaKnown RBP3.31□□□□□ -1.88
NEDD4-209ENST00000508871 FOXL1Q12952 345 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 MORN5Q5VZ52 161 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 STPG2Q8N412 459 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 PACRGLQ8N7B6 248 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 FMC1Q96HJ9 113 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 OR8D2Q9GZM6 311 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 LINC00597Q9H2U6 94 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 PRO0628Q9UI54 55 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 VSIG4Q9Y279 399 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 ZFHX3Q15911 3703 aa3.31□□□□□ -1.88
NEDD4-209ENST00000508871 PRR19A6NJB7 356 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 PPIBP23284 216 aaKnown RBP3.3□□□□□ -1.88
NEDD4-209ENST00000508871 RELAQ04206 551 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 CST6Q15828 149 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms