RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 NXF2Q9GZY0 626 aaKnown RBP4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 ATG5Q9H1Y0 275 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 GAL3ST2Q9H3Q3 398 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 LINC00574Q9H8X3 128 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 IL36RNQ9UBH0 155 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 KCNS2Q9ULS6 477 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 INSIG2Q9Y5U4 225 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 NSD1Q96L73 2696 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 MEIKINA0A087WXM9 373 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 A0A0A6YYD4 124 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 A0A1B0GW55 424 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 A0A1W2PQ09 198 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 ODAMA1E959 279 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 CYSRT1A8MQ03 144 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 A8MV72 311 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 SULT1C2O00338 296 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 MFNGO00587 321 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 SOCS1O15524 211 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 PHF1O43189 567 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 DIRAS3O95661 229 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 MT-ND4P03905 459 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 MELTFP08582 738 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 CD3GP09693 182 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 DUX4L2P0CJ85 424 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 DUX4L3P0CJ86 424 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 DUX4L4P0CJ87 422 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 DUX4L5P0CJ88 424 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 DUX4L6P0CJ89 424 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 DUX4L7P0CJ90 424 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 ZNF728P0DKX0 622 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 HNF1AP20823 631 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 DTYMKP23919 212 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 PRTN3P24158 256 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 S100A5P33763 92 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 CBX5P45973 191 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 CEBPDP49716 269 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 SEC61A1P61619 476 aaKnown RBP4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 MRPS10P82664 201 aaKnown RBP4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 AESQ08117 197 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 Q3ZCU0 254 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 METTL11BQ5VVY1 283 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 HACD4Q5VWC8 232 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 NCR3LG1Q68D85 454 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 DUX4L9Q6RFH8 374 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 METAP1DQ6UB28 335 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 Q6ZS49 121 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 FAM185AQ8N0U4 392 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 CIARTQ8N365 385 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 SAMD12Q8N8I0 201 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR52M1Q8NGK5 317 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR5H6Q8NGV6 325 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 SLC25A38Q96DW6 304 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 COQ2Q96H96 371 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 ARHGAP5-AS1Q96IT6 56 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 ZNF714Q96N38 554 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 WDFY2Q96P53 400 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 SULT4A1Q9BR01 284 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 NICN1Q9BSH3 213 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 PECRQ9BY49 303 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 SLIRPQ9GZT3 109 aaKnown RBP4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 CHST6Q9GZX3 395 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 PPA2Q9H2U2 334 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 HEXA-AS1Q9H8Q6 139 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 HIF1ANQ9NWT6 349 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 KCNIP1Q9NZI2 227 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 COMMD3Q9UBI1 195 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 DUX4Q9UBX2 424 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 TRAPPC2LQ9UL33 140 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 AUP1Q9Y679 476 aa4.49□□□□□ -1.69
HMGB1P44-201ENST00000508597 A0A0B4J203 849 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 KBTBD11-OT1A0A1B0GTJ5 212 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 C17orf98A8MV24 154 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 FAM25AB3EWG3 89 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 FAM25CB3EWG5 89 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 FAM25GB3EWG6 89 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 NPIPB11E5RHQ5 1161 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 RGS5O15539 181 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 SPINT2O43291 252 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 FCN3O75636 299 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 NAPSAO96009 420 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 CGB3P0DN86 165 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 CGB7P0DN87 165 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 SELLP14151 372 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 CDK2P24941 298 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 PTBP1P26599 531 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 RBMXP38159 391 aaKnown RBP4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 GLP1RP43220 463 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 KIR2DS4P43632 304 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 GLIPR1P48060 266 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 EFNB2P52799 333 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 SRSF4Q08170 494 aaKnown RBP4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 ARFRP1Q13795 201 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 EDDM3AQ14507 147 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 KIR2DS1Q14954 304 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 ATXN7L3Q14CW9 347 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 ZNF260Q3ZCT1 412 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 CDNFQ49AH0 187 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 LY6G6FQ5SQ64 297 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 TMEM69Q5SWH9 247 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 PYHIN1Q6K0P9 492 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms