RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 H1FOOQ8IZA3 346 aaPredicted RBP6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 ZCCHC24Q8N2G6 241 aaKnown RBP6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 NEXN-AS1Q8NBZ9 246 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 OR6F1Q8NGZ6 308 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 OR1L1Q8NH94 360 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 JOSD2Q8TAC2 188 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 ISOC1Q96CN7 298 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 CNBD2Q96M20 576 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 RBFOX1Q9NWB1 397 aaKnown RBP6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 TMEM45AQ9NWC5 275 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 TAAR2Q9P1P5 351 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 SMCHD1A6NHR9 2005 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 IGKV1D-8A0A087WSZ0 117 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 SAA2-SAA4A0A096LPE2 208 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 A0A0G2JND7 137 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 MYOCOSA0A1B0GUC4 107 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 MYBPHLA2RUH7 354 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 C9JAW5 83 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 LINC01619G3V211 115 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 H7C417 338 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 SAP18O00422 153 aaKnown RBP6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 HBZP02008 142 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 SELEP16581 610 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 PFN2P35080 140 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 HBG1P69891 147 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 HBG2P69892 147 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 ECSCRQ19T08 205 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 ZNF181Q2M3W8 571 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 LINC00114Q6XXX2 140 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 ZNF418Q8TF45 676 aaPredicted RBP6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 APOBEC4Q8WW27 367 aaKnown RBP6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 MYEOVQ96EZ4 313 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 HES4Q9HCC6 221 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 RNF7Q9UBF6 113 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 HCSTQ9UBK5 93 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 RPS6KB2Q9UBS0 482 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 HIGD1AQ9Y241 93 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 UGT2A1Q9Y4X1 527 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 ZMYM2Q9UBW7 1377 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 COL11A2P13942 1736 aaPredicted RBP6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 TEX50A0A1B0GTY4 177 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 DUXBA0A1W2PPF3 345 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 GAGE12JA6NER3 117 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 SLC17A2O00624 439 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 ZFAND5O76080 213 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 GAGE7O76087 117 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 EPPINO95925 133 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 LGALS1P09382 135 aaKnown RBP6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 GAGE12FP0CL80 117 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 GAGE12GP0CL81 117 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 GAGE12IP0CL82 117 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 SPNP16150 400 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 RCC1P18754 421 aaPredicted RBP6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 G6PCP35575 357 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 HOXA4Q00056 320 aaPredicted RBP6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 SRSF4Q08170 494 aaKnown RBP6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 GAGE4Q13068 117 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 ZNF260Q3ZCT1 412 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 TMEM207Q6UWW9 146 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 DGAT2L6Q6ZPD8 337 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 SLC22A15Q8IZD6 547 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 TCTEX1D1Q8N7M0 179 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 FAM151AQ8WW52 585 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 BTN2A3PQ96KV6 586 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 SCN3BQ9NY72 215 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 ORC6Q9Y5N6 252 aa6.07□□□□□ -1.44
PDGFRA-206ENST00000508170 LOC100130705A0A1B0GUX0 176 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 ZNF682O95780 498 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 ATP5G1P05496 136 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 OR4A8P0C604 315 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 AGTR1P30556 359 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 POLR2HP52434 150 aaKnown RBP6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 RPS25P62851 125 aaKnown RBP6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 CAV1Q03135 178 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 GSG1Q2KHT4 349 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 SLC35E4Q6ICL7 350 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 EXOC3-AS1Q8N2X6 119 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 PRSS33Q8NF86 280 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 VN1R17PQ8TDU5 208 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 IGFBPL1Q8WX77 278 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 TMEM230Q96A57 120 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 C2orf48Q96LS8 159 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 PSMG3Q9BT73 122 aaPredicted RBP6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 OR51I2Q9H344 312 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 A0A1B0GV50 99 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 A0A1B0GW64 132 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 KRBOX1C9JBD0 128 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 D6RAR5 112 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 DNASE2O00115 360 aaPredicted RBP6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 ZNF354AO60765 605 aaPredicted RBP6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 BRWD1-AS2P59051 145 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 SRSF3P84103 164 aaKnown RBP6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 SLC10A2Q12908 348 aaPredicted RBP6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 C1DQ13901 141 aaKnown RBP6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 C16orf72Q14CZ0 275 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 PAFAH1B3Q15102 231 aaKnown RBP6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 Q6ZSV7 163 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 ZNF720Q7Z2F6 126 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 SLC35G3Q8N808 338 aa6.06□□□□□ -1.44
PDGFRA-206ENST00000508170 FNDC9Q8TBE3 224 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms