RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 OR1P1Q8NH06 330 aa11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 GATAD1Q8WUU5 269 aa11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 LHX4Q969G2 390 aa11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 MISP3Q96FF7 219 aa11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 DUSP23Q9BVJ7 150 aa11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 NAT8Q9UHE5 227 aa11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 MED12LQ86YW9 2145 aa11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 CYTIPO60759 359 aa11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 IGFBP4P22692 258 aa11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 ZNF585BQ52M93 769 aa11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 SAP25Q8TEE9 199 aa11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 PHF7Q9BWX1 381 aaPredicted RBP11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 PRSS50Q9UI38 385 aa11.39□□□□□ -0.59
SNCAIP-209ENST00000508017 A0A1W2PR80 420 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 APLNRP35414 380 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 RPL23P62829 140 aaKnown RBP11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 SERF2P84101 59 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 TESK1Q15569 626 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 OR8G2PQ6IF36 304 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 CYP2G1PQ6ZSU1 146 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 ZNF664Q8N3J9 261 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 TAF15Q92804 592 aaKnown RBP eCLIP11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 HIST1H2AAQ96QV6 131 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 OR51B6Q9H340 312 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 ZNF576Q9H609 170 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 DLL3Q9NYJ7 618 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 RNF150Q9ULK6 438 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 R4GN57 208 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 DOCK11Q5JSL3 2073 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 XKRY2A2RUG3 117 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 DVL1O14640 695 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 RHBDL1O75783 438 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 IFNA1P01562 189 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 TAS2R60P59551 318 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 HBG1P69891 147 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 HBG2P69892 147 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 MEF2BQ02080 365 aaPredicted RBP11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 Q0VFX4 171 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 PRSS8Q16651 343 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 TMEM241Q24JQ0 296 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 ACSM6Q6P461 480 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 OR2Y1Q8NGV0 311 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 LSM10Q969L4 123 aaKnown RBP11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 PYGO2Q9BRQ0 406 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 PCGF1Q9BSM1 259 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 SLC25A22Q9H936 323 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 SLC39A9Q9NUM3 307 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 KCNS2Q9ULS6 477 aa11.38□□□□□ -0.59
SNCAIP-209ENST00000508017 MKRN2OSH3BPM6 223 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 MRPL33O75394 65 aaKnown RBP11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 KBTBD11O94819 623 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 GDF1P27539 372 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 GALR1P47211 349 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 SRYQ05066 204 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 SLC38A11Q08AI6 406 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 IL11RAQ14626 422 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 BSXQ3C1V8 233 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 OR51G1Q8NGK1 321 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 IFI44Q8TCB0 444 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 MRPS17Q9Y2R5 130 aaKnown RBP11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 TRBV6-6A0A0A6YYG2 114 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 A8MWP6 167 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 FGF7P21781 194 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 ZNF66Q6ZN08 573 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 DBX2Q6ZNG2 339 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 SPEM1Q8N4L4 309 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 RNASEH2CQ8TDP1 164 aaKnown RBP11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 SGCZQ96LD1 299 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 AGMATQ9BSE5 352 aa11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 RIMS4Q9H426 269 aaPredicted RBP11.37□□□□□ -0.59
SNCAIP-209ENST00000508017 DOCK10Q96BY6 2186 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 ZNF705GA8MUZ8 300 aaPredicted RBP11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 H7BYZ3 331 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 K7ESF4 209 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 ST8SIA5O15466 376 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 GALR2O43603 387 aaPredicted RBP11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 WDR1O75083 606 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 IL18BPO95998 194 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 RPS16P62249 146 aaKnown RBP11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 ACSF3Q4G176 576 aaPredicted RBP11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 FAM58AQ8N1B3 248 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 OR5A2Q8NGI9 324 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 OR5P3Q8WZ94 311 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 PARLQ9H300 379 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 TMEM9BQ9NQ34 198 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 RBM7Q9Y580 266 aaKnown RBP11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 FAM186AA6NE01 2351 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 A0A1W2PPQ1 181 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 IFNL4K9M1U5 179 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 Q3ZCU0 254 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 APOBEC3DQ96AK3 386 aaPredicted RBP11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 PINX1Q96BK5 328 aaKnown RBP11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 PLA2G3Q9NZ20 509 aa11.36□□□□□ -0.59
SNCAIP-209ENST00000508017 PPP5D1E7EU14 171 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 DEGS1O15121 323 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 CLDN1O95832 211 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 DEFA4P12838 97 aa11.35□□□□□ -0.59
SNCAIP-209ENST00000508017 OTX2P32243 289 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms