RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 EML6Q6ZMW3 1958 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 CTXND1A0A1B0GTU2 59 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 UBE2L5PA0A1B0GUS4 154 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 TNFSF13O75888 250 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 GCH1P30793 250 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 UBE2NP61088 152 aaKnown RBP14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 ACSM6Q6P461 480 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 PLXDC1Q8IUK5 500 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 SDSLQ96GA7 329 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 WDYHV1Q96HA8 205 aa14.55□□□□□ -0.08
SQSTM1-211ENST00000506690 HMGB3O15347 200 aaKnown RBP14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 MLNRO43193 412 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 GALR2O43603 387 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 ZFAND5O76080 213 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 BCL3P20749 454 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 ARSJQ5FYB0 599 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 FAM78BQ5VT40 261 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 ZNF324BQ6AW86 544 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 TEX43Q6ZNM6 134 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 SPACA9Q96E40 222 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 DIRC2Q96SL1 478 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 STRADBQ9C0K7 418 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 OR2W1Q9Y3N9 320 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 CD300LBA8K4G0 201 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 PDGFBP01127 241 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 CD99P14209 185 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 ZNF32P17041 273 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 HNRNPKP61978 463 aaKnown RBP eCLIP14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 PRR18Q8N4B5 295 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 BTF3L4Q96K17 158 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 HS3ST6Q96QI5 342 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 OPN3Q9H1Y3 402 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 SLC25A22Q9H936 323 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 TMEM106BQ9NUM4 274 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 PLA2G3Q9NZ20 509 aa14.54□□□□□ -0.08
SQSTM1-211ENST00000506690 LMO7DNF2Z398 122 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 IGKV1-5P01602 117 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 CHRNA7P36544 502 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 SLC38A11Q08AI6 406 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 ANKRD39Q53RE8 183 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 NEIL1Q96FI4 390 aaPredicted RBP14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 ADAMTS20P59510 1910 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 A0A0U1RQK1 487 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 ZNF320A2RRD8 509 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 PATE4P0C8F1 98 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 FGF12P61328 243 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 TDRG1Q3Y452 100 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 SPANXN5Q5MJ07 72 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 TPTE2P1Q5T6R2 138 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 PRAMEF20Q5VT98 475 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 OR10V1Q8NGI7 309 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 TMEM38BQ9NVV0 291 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 CHCHD2Q9Y6H1 151 aaPredicted RBP14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 LAMA1P25391 3075 aa14.53□□□□□ -0.08
SQSTM1-211ENST00000506690 IL6RP08887 468 aaPredicted RBP14.52□□□□□ -0.08
SQSTM1-211ENST00000506690 NPPCP23582 126 aa14.52□□□□□ -0.08
SQSTM1-211ENST00000506690 PSG4Q00888 419 aa14.52□□□□□ -0.08
SQSTM1-211ENST00000506690 FOXL1Q12952 345 aa14.52□□□□□ -0.08
SQSTM1-211ENST00000506690 PARD6AQ9NPB6 346 aa14.52□□□□□ -0.08
SQSTM1-211ENST00000506690 PRUNE2Q8WUY3 3088 aa14.52□□□□□ -0.09
SQSTM1-211ENST00000506690 KIAA1549Q9HCM3 1950 aa14.52□□□□□ -0.09
SQSTM1-211ENST00000506690 TNFSF11O14788 317 aa14.52□□□□□ -0.09
SQSTM1-211ENST00000506690 SELEP16581 610 aa14.52□□□□□ -0.09
SQSTM1-211ENST00000506690 SOX8P57073 446 aa14.52□□□□□ -0.09
SQSTM1-211ENST00000506690 PPP1CBP62140 327 aa14.52□□□□□ -0.09
SQSTM1-211ENST00000506690 CST9LP1Q5W188 147 aa14.52□□□□□ -0.09
SQSTM1-211ENST00000506690 TMEM14EPQ6UXP3 125 aa14.52□□□□□ -0.09
SQSTM1-211ENST00000506690 Q6ZS52 159 aa14.52□□□□□ -0.09
SQSTM1-211ENST00000506690 LINC01551Q86U37 167 aa14.52□□□□□ -0.09
SQSTM1-211ENST00000506690 OR1K1Q8NGR3 316 aa14.52□□□□□ -0.09
SQSTM1-211ENST00000506690 HSPB6O14558 160 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 DUX1O43812 170 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 TNFSF10P50591 281 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 ZNF468Q5VIY5 522 aaPredicted RBP14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 TOMM20LQ6UXN7 152 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 C20orf204Q6ZNR8 217 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 Q6ZWC4 215 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 IL36RNQ9UBH0 155 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 ARHGAP21Q5T5U3 1957 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 CNTRLQ7Z7A1 2325 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 A0A1W2PR77 199 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 C1QTNF9BB2RNN3 333 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 PAGE4O60829 102 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 IGLV2-14P01704 120 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 EDN3P14138 238 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 CD38P28907 300 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 DMRTA1Q5VZB9 504 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 OR10G9Q8NGN4 311 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 OR10G7Q8NGN6 311 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 CMTM2Q8TAZ6 248 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 SPSB4Q96A44 273 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 CLDN23Q96B33 292 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 OR2J1Q9GZK6 312 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 WNT5BQ9H1J7 359 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 PRO3102Q9H379 93 aa14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 ERRFI1Q9UJM3 462 aaPredicted RBP14.51□□□□□ -0.09
SQSTM1-211ENST00000506690 TMPRSS2O15393 492 aa14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 UMODP07911 640 aa14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 CD33P20138 364 aa14.5□□□□□ -0.09
SQSTM1-211ENST00000506690 RANP62826 216 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms