RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 MAGEL2Q9UJ55 1249 aa5.21□□□□□ -1.58
VCAN-206ENST00000505615 NUBP2Q9Y5Y2 271 aa5.21□□□□□ -1.58
VCAN-206ENST00000505615 V9GYQ6 96 aa5.21□□□□□ -1.58
VCAN-206ENST00000505615 MEIKINA0A087WXM9 373 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 TRAV39A0A0B4J263 110 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 TRAV24A0A0B4J272 114 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 IGKV1-9A0A0C4DH69 117 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 C9orf118A6NHY6 69 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 MAGEB3O15480 346 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 PAGE4O60829 102 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 ZNF254O75437 659 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 GATBO75879 557 aaKnown RBP5.2□□□□□ -1.58
VCAN-206ENST00000505615 KDM4BO94953 1096 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 NDUFA3O95167 84 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 RAP2AP10114 183 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 PCP4P48539 62 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 TPPP2P59282 170 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 EFNB1P98172 346 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 PAX5Q02548 391 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 PDZK1IP1Q13113 114 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 APOFQ13790 326 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 MAPRE2Q15555 327 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 C5orf64Q2M2E5 130 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 CD300EQ496F6 205 aaPredicted RBP5.2□□□□□ -1.58
VCAN-206ENST00000505615 BCL2L15Q5TBC7 163 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 PLEKHG7Q6ZR37 379 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 TCTEX1D1Q8N7M0 179 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 C8orf31Q8N9H6 132 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 DNAAF1Q8NEP3 725 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 OR2K2Q8NGT1 345 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 PLPPR1Q8TBJ4 325 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 MS4A10Q96PG2 267 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 KCTD14Q9BQ13 255 aaPredicted RBP5.2□□□□□ -1.58
VCAN-206ENST00000505615 GGTLC1Q9BX51 225 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 MROQ9BYG7 248 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 YIPF3Q9GZM5 350 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 MOB1AQ9H8S9 216 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 SAR1AQ9NR31 198 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 OR52A1Q9UKL2 312 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 SAMD4AQ9UPU9 718 aaKnown RBP5.2□□□□□ -1.58
VCAN-206ENST00000505615 R4GMQ9 66 aa5.2□□□□□ -1.58
VCAN-206ENST00000505615 A0A0G2JND7 137 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 LINC00854A0A1B0GVQ3 168 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 C15orf65H3BRN8 121 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 HSPB6O14558 160 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 NBR2O15453 112 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 MAGEB4O15481 346 aaPredicted RBP5.19□□□□□ -1.58
VCAN-206ENST00000505615 CYB5AP00167 134 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 C21orf33P30042 268 aaPredicted RBP5.19□□□□□ -1.58
VCAN-206ENST00000505615 RBP2P50120 134 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 ACTBP60709 375 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 DYRK1AQ13627 763 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 GLYATQ6IB77 296 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 PYHIN1Q6K0P9 492 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 CD200R1LQ6Q8B3 271 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 SLC25A48Q6ZT89 311 aaKnown RBP5.19□□□□□ -1.58
VCAN-206ENST00000505615 KCTD9Q7L273 389 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 TMEM179BQ7Z7N9 219 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 GVQW1Q8N7I0 195 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 MAPKAPK5-AS1Q8N8E1 139 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 ZNF565Q8N9K5 539 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 AQP11Q8NBQ7 271 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 ZNF439Q8NDP4 499 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 OR52M1Q8NGK5 317 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 RFT1Q96AA3 541 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 PYURFQ96I23 114 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 APOL4Q9BPW4 351 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 SRSF8Q9BRL6 282 aaKnown RBP5.19□□□□□ -1.58
VCAN-206ENST00000505615 DGCR6LQ9BY27 220 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 CST11Q9H112 138 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 TMBIM4Q9HC24 238 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 RANGRFQ9HD47 186 aaPredicted RBP5.19□□□□□ -1.58
VCAN-206ENST00000505615 ZC4H2Q9NQZ6 224 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 SLC2A8Q9NY64 477 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 CNOT2Q9NZN8 540 aaKnown RBP5.19□□□□□ -1.58
VCAN-206ENST00000505615 ABCD2Q9UBJ2 740 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 IKZF2Q9UKS7 526 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 GAB2Q9UQC2 676 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 TP53TG1Q9Y2A0 90 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 A3GALT2U3KPV4 340 aa5.19□□□□□ -1.58
VCAN-206ENST00000505615 IGHV3-43A0A0B4J1X8 118 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 SMIM30A4D0T7 59 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 CCDC182A6NF36 153 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 DEGS1O15121 323 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 XRCC3O43542 346 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 LANCL1O43813 399 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 EDF1O60869 148 aaKnown RBP5.18□□□□□ -1.58
VCAN-206ENST00000505615 CDK2AP2O75956 126 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 CCNB2O95067 398 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 TRBV12-3P01733 135 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 FABP3P05413 133 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 MRPL3P09001 348 aaKnown RBP5.18□□□□□ -1.58
VCAN-206ENST00000505615 IGHV3-43DP0DP04 118 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 GYPEP15421 78 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 IL3RAP26951 378 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 BMI1P35226 326 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 ZNF134P52741 427 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 ATP1B3P54709 279 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 CX3CL1P78423 397 aa5.18□□□□□ -1.58
VCAN-206ENST00000505615 PPP1R8Q12972 351 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms