RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 CCL13Q99616 98 aa11.02□□□□□ -0.65
LMNA-220ENST00000504687 AGMATQ9BSE5 352 aa11.02□□□□□ -0.65
LMNA-220ENST00000504687 OR2S2Q9NQN1 319 aa11.02□□□□□ -0.65
LMNA-220ENST00000504687 LIN7CQ9NUP9 197 aaKnown RBP11.02□□□□□ -0.65
LMNA-220ENST00000504687 CALYQ9NYX4 217 aa11.02□□□□□ -0.65
LMNA-220ENST00000504687 CLN8Q9UBY8 286 aa11.02□□□□□ -0.65
LMNA-220ENST00000504687 PAIP2BQ9ULR5 123 aaKnown RBP11.02□□□□□ -0.65
LMNA-220ENST00000504687 TNFSF18Q9UNG2 199 aa11.02□□□□□ -0.65
LMNA-220ENST00000504687 BOLA1Q9Y3E2 137 aa11.02□□□□□ -0.65
LMNA-220ENST00000504687 L7N2F9 121 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 HSD17B6O14756 317 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 HOXB5P09067 269 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 OR8U9P0C7N5 309 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 CXCL2P19875 107 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 PRSS54Q6PEW0 395 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 ZNF66Q6ZN08 573 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 ZNF767PQ75MW2 155 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 TCF23Q7RTU1 214 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 SELENOHQ8IZQ5 122 aaKnown RBP11.01□□□□□ -0.65
LMNA-220ENST00000504687 PRR18Q8N4B5 295 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 DRAM1Q8N682 238 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 TPRX1Q8N7U7 411 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.01□□□□□ -0.65
LMNA-220ENST00000504687 DEFB108BQ8NET1 73 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 OR52L2PQ8NGH6 319 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 OR8U1Q8NH10 309 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 GRPEL2Q8TAA5 225 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 LHFPL5Q8TAF8 219 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 THAP6Q8TBB0 222 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 CCL17Q92583 94 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 RBPMSQ93062 196 aaKnown RBP11.01□□□□□ -0.65
LMNA-220ENST00000504687 SPIN2AQ99865 258 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 SPIN2BQ9BPZ2 258 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 HEXA-AS1Q9H8Q6 139 aa11.01□□□□□ -0.65
LMNA-220ENST00000504687 SLC25A10Q9UBX3 287 aaPredicted RBP11.01□□□□□ -0.65
LMNA-220ENST00000504687 KLF2Q9Y5W3 355 aaPredicted RBP11.01□□□□□ -0.65
LMNA-220ENST00000504687 DIDO1Q9BTC0 2240 aaKnown RBP11.01□□□□□ -0.65
LMNA-220ENST00000504687 KIAA2026Q5HYC2 2103 aa11□□□□□ -0.65
LMNA-220ENST00000504687 KALRNO60229 2985 aa11□□□□□ -0.65
LMNA-220ENST00000504687 C13orf42A0A1B0GVH6 325 aa11□□□□□ -0.65
LMNA-220ENST00000504687 FAM25EA8MYX2 175 aa11□□□□□ -0.65
LMNA-220ENST00000504687 TMPRSS2O15393 492 aa11□□□□□ -0.65
LMNA-220ENST00000504687 IGHV2-70P01814 119 aa11□□□□□ -0.65
LMNA-220ENST00000504687 VDAC1P21796 283 aa11□□□□□ -0.65
LMNA-220ENST00000504687 S100A11P31949 105 aa11□□□□□ -0.65
LMNA-220ENST00000504687 RAB7AP51149 207 aa11□□□□□ -0.65
LMNA-220ENST00000504687 EDDM3BP56851 147 aa11□□□□□ -0.65
LMNA-220ENST00000504687 IAH1Q2TAA2 248 aaPredicted RBP11□□□□□ -0.65
LMNA-220ENST00000504687 SP6Q3SY56 376 aa11□□□□□ -0.65
LMNA-220ENST00000504687 LRRC10Q5BKY1 277 aa11□□□□□ -0.65
LMNA-220ENST00000504687 ACOT7LQ6ZUV0 252 aa11□□□□□ -0.65
LMNA-220ENST00000504687 ZNF546Q86UE3 836 aa11□□□□□ -0.65
LMNA-220ENST00000504687 KCNRGQ8N5I3 272 aa11□□□□□ -0.65
LMNA-220ENST00000504687 FAM216BQ8N7L0 139 aa11□□□□□ -0.65
LMNA-220ENST00000504687 LSM10Q969L4 123 aaKnown RBP11□□□□□ -0.65
LMNA-220ENST00000504687 DCTN5Q9BTE1 182 aa11□□□□□ -0.65
LMNA-220ENST00000504687 RNF126Q9BV68 326 aa11□□□□□ -0.65
LMNA-220ENST00000504687 PARP12Q9H0J9 701 aaKnown RBP11□□□□□ -0.65
LMNA-220ENST00000504687 PLEKHF2Q9H8W4 249 aa11□□□□□ -0.65
LMNA-220ENST00000504687 GFOD1Q9NXC2 390 aa11□□□□□ -0.65
LMNA-220ENST00000504687 PRR13Q9NZ81 148 aa11□□□□□ -0.65
LMNA-220ENST00000504687 ICE1Q9Y2F5 2266 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 TRBV23-1A0A0A0MS06 115 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 MPTX1A8MV57 137 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 NDUFB3O43676 98 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 SELLP14151 372 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 CATR1Q13166 79 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 GNMTQ14749 295 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 OPCMLQ14982 345 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 TMEM155Q4W5P6 130 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 NMSQ5H8A3 153 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 TMEM268Q5VZI3 342 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 LYZL2Q7Z4W2 148 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 ZNF695Q8IW36 515 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 SLC35G3Q8N808 338 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 C8orf31Q8N9H6 132 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 HSD17B10Q99714 261 aaKnown RBP10.99□□□□□ -0.65
LMNA-220ENST00000504687 SPOCK3Q9BQ16 436 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 MFFQ9GZY8 342 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 GAL3ST2Q9H3Q3 398 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 IDI2-AS1Q9NZ38 188 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 ITGB1BP2Q9UKP3 347 aa10.99□□□□□ -0.65
LMNA-220ENST00000504687 RBM7Q9Y580 266 aaKnown RBP10.99□□□□□ -0.65
LMNA-220ENST00000504687 CFAP46Q8IYW2 2715 aa10.98□□□□□ -0.65
LMNA-220ENST00000504687 FXYD6-FXYD2A0A087WZ82 144 aa10.98□□□□□ -0.65
LMNA-220ENST00000504687 A0A1B0GW55 424 aa10.98□□□□□ -0.65
LMNA-220ENST00000504687 A6NNC1 897 aa10.98□□□□□ -0.65
LMNA-220ENST00000504687 C19orf84I3L1E1 186 aa10.98□□□□□ -0.65
LMNA-220ENST00000504687 ARPC5O15511 151 aa10.98□□□□□ -0.65
LMNA-220ENST00000504687 ADAM20O43506 726 aa10.98□□□□□ -0.65
LMNA-220ENST00000504687 SOD3P08294 240 aa10.98□□□□□ -0.65
LMNA-220ENST00000504687 DUX4L2P0CJ85 424 aa10.98□□□□□ -0.65
LMNA-220ENST00000504687 DUX4L3P0CJ86 424 aa10.98□□□□□ -0.65
LMNA-220ENST00000504687 DUX4L4P0CJ87 422 aa10.98□□□□□ -0.65
LMNA-220ENST00000504687 DUX4L5P0CJ88 424 aa10.98□□□□□ -0.65
LMNA-220ENST00000504687 DUX4L6P0CJ89 424 aa10.98□□□□□ -0.65
LMNA-220ENST00000504687 DUX4L7P0CJ90 424 aa10.98□□□□□ -0.65
LMNA-220ENST00000504687 PLA2G2AP14555 144 aa10.98□□□□□ -0.65
LMNA-220ENST00000504687 PPP1CCP36873 323 aaKnown RBP10.98□□□□□ -0.65
LMNA-220ENST00000504687 NDUFA5Q16718 116 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms