RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 RAB18Q9NP72 206 aa14.6□□□□□ -0.07
SQSTM1-209ENST00000504627 TMEM30CPA0ZSE6 113 aa14.59□□□□□ -0.07
SQSTM1-209ENST00000504627 MEX3AA1L020 520 aaKnown RBP14.59□□□□□ -0.07
SQSTM1-209ENST00000504627 ZNF736B4DX44 427 aaPredicted RBP14.59□□□□□ -0.07
SQSTM1-209ENST00000504627 LYRM1O43325 122 aa14.59□□□□□ -0.07
SQSTM1-209ENST00000504627 AKAIN1P0CW23 69 aa14.59□□□□□ -0.07
SQSTM1-209ENST00000504627 PAX6P26367 422 aa14.59□□□□□ -0.07
SQSTM1-209ENST00000504627 TAS2R46P59540 309 aa14.59□□□□□ -0.07
SQSTM1-209ENST00000504627 EDDM3AQ14507 147 aa14.59□□□□□ -0.07
SQSTM1-209ENST00000504627 ATXN7L3Q14CW9 347 aaPredicted RBP14.59□□□□□ -0.07
SQSTM1-209ENST00000504627 ZNF497Q6ZNH5 498 aa14.59□□□□□ -0.07
SQSTM1-209ENST00000504627 Q6ZS49 121 aa14.59□□□□□ -0.07
SQSTM1-209ENST00000504627 GVQW1Q8N7I0 195 aa14.59□□□□□ -0.07
SQSTM1-209ENST00000504627 OR13D1Q8NGV5 346 aa14.59□□□□□ -0.07
SQSTM1-209ENST00000504627 SNAPC3Q92966 411 aa14.59□□□□□ -0.07
SQSTM1-209ENST00000504627 CHMP1AQ9HD42 196 aaPredicted RBP14.59□□□□□ -0.07
SQSTM1-209ENST00000504627 NAP1L6A6NFF2 107 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 CENPXA8MT69 81 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 C17orf98A8MV24 154 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 MGST3O14880 152 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 PLA2G10O15496 165 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 KCNAB3O43448 404 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 CD74P04233 296 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 ZNF728P0DKX0 622 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 DEFA6Q01524 100 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 AANATQ16613 207 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 RSBN1Q5VWQ0 802 aaPredicted RBP14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 MZT2BQ6NZ67 158 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 MINDY2Q8NBR6 621 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 BEST4Q8NFU0 473 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 OR4S1Q8NGB4 309 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 PLPPR1Q8TBJ4 325 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 MRPL30Q8TCC3 161 aaKnown RBP14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 AJUBAQ96IF1 538 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 C11orf54Q9H0W9 315 aaPredicted RBP14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 ZNF286AQ9HBT8 521 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 MGAT4AQ9UM21 535 aa14.58□□□□□ -0.08
SQSTM1-209ENST00000504627 DSCAML1Q8TD84 2053 aa14.57□□□□□ -0.08
SQSTM1-209ENST00000504627 CMYA5Q8N3K9 4069 aa14.57□□□□□ -0.08
SQSTM1-209ENST00000504627 LINC00854A0A1B0GVQ3 168 aa14.57□□□□□ -0.08
SQSTM1-209ENST00000504627 hADV38S2A0JD32 116 aa14.57□□□□□ -0.08
SQSTM1-209ENST00000504627 ARG1P05089 322 aa14.57□□□□□ -0.08
SQSTM1-209ENST00000504627 MEF2DQ14814 521 aa14.57□□□□□ -0.08
SQSTM1-209ENST00000504627 GRK1Q15835 563 aa14.57□□□□□ -0.08
SQSTM1-209ENST00000504627 STEAP1BQ6NZ63 245 aa14.57□□□□□ -0.08
SQSTM1-209ENST00000504627 ZNF880Q6PDB4 577 aa14.57□□□□□ -0.08
SQSTM1-209ENST00000504627 LHFPL4Q7Z7J7 247 aa14.57□□□□□ -0.08
SQSTM1-209ENST00000504627 OR4C13Q8NGP0 309 aa14.57□□□□□ -0.08
SQSTM1-209ENST00000504627 ZNF714Q96N38 554 aa14.57□□□□□ -0.08
SQSTM1-209ENST00000504627 FUOMA2VDF0 154 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 RBP4P02753 201 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 KIR2DS4P43632 304 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 DLX6P56179 175 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 MEF2CQ06413 473 aaPredicted RBP14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 KIR2DS1Q14954 304 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 PLA1AQ53H76 456 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 RNASE10Q5GAN6 216 aaKnown RBP14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 VAX1Q5SQQ9 334 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 Q6ZPA2 131 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 TPRX1Q8N7U7 411 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 OR4C16Q8NGL9 310 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 COQ2Q96H96 371 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 ST6GALNAC5Q9BVH7 336 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 NCOR1P1Q9H4R4 102 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 HRASLSQ9HDD0 168 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 Q9N2K0 584 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 ZNF230Q9UIE0 474 aaPredicted RBP14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 TBL2Q9Y4P3 447 aaKnown RBP14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 WNK1Q9H4A3 2382 aa14.56□□□□□ -0.08
SQSTM1-209ENST00000504627 RAB3DO95716 219 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 MT-ND4P03905 459 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 CD3DP04234 171 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 IGHV1-8P0DP01 117 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 HLA-DMAP28067 261 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 ERP29P30040 261 aaKnown RBP14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 P2RX3P56373 397 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 KRBOX4Q5JUW0 171 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 OR52W1Q6IF63 320 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 LIAT1Q6ZQX7 453 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 OR5H2Q8NGV7 314 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 OR4K15Q8NH41 348 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 OR2T6Q8NHC8 308 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 ENKURQ8TC29 256 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 CHPT1Q8WUD6 406 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 NPFFR1Q9GZQ6 430 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 MBNL3Q9NUK0 354 aaKnown RBP14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 ANXA10Q9UJ72 324 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 SIGLEC9Q9Y336 463 aa14.55□□□□□ -0.08
SQSTM1-209ENST00000504627 FCER2P06734 321 aa14.54□□□□□ -0.08
SQSTM1-209ENST00000504627 BTCP35070 178 aa14.54□□□□□ -0.08
SQSTM1-209ENST00000504627 HRH1P35367 487 aa14.54□□□□□ -0.08
SQSTM1-209ENST00000504627 HLA-DRB3P79483 266 aa14.54□□□□□ -0.08
SQSTM1-209ENST00000504627 OXA1LQ15070 435 aa14.54□□□□□ -0.08
SQSTM1-209ENST00000504627 SSX2Q16385 188 aa14.54□□□□□ -0.08
SQSTM1-209ENST00000504627 C2orf68Q2NKX9 166 aa14.54□□□□□ -0.08
SQSTM1-209ENST00000504627 C6orf183Q5T699 404 aa14.54□□□□□ -0.08
SQSTM1-209ENST00000504627 TRAT1Q6PIZ9 186 aa14.54□□□□□ -0.08
SQSTM1-209ENST00000504627 ZNF554Q86TJ5 538 aa14.54□□□□□ -0.08
SQSTM1-209ENST00000504627 OR5AP2Q8NGF4 316 aa14.54□□□□□ -0.08
SQSTM1-209ENST00000504627 MAFIPQ8WZ33 124 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms