RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 OR52L2PQ8NGH6 319 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 OR52B4Q8NGK2 314 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 RFESDQ8TAC1 157 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 CASTOR1Q8WTX7 329 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 IL22RA2Q969J5 263 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 PIMREGQ9BSJ6 248 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 SSBP3Q9BWW4 388 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 ZNF436Q9C0F3 470 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 RANBP3Q9H6Z4 567 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 RAB18Q9NP72 206 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 C19orf12Q9NSK7 152 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 FAM212BQ9NTI7 297 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 LIN7CQ9NUP9 197 aaKnown RBP6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 DUX4Q9UBX2 424 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 RPUSD1Q9UJJ7 312 aaKnown RBP6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 KCNS2Q9ULS6 477 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 CFAP46Q8IYW2 2715 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 RELNP78509 3460 aa6.72□□□□□ -1.33
TOPBP1-202ENST00000503338 SPTAN1Q13813 2472 aaKnown RBP6.71□□□□□ -1.33
TOPBP1-202ENST00000503338 C3orf85A0A1B0GTC6 90 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 DBX1A6NMT0 343 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 H0Y980 276 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 HSD17B6O14756 317 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 PGLYRP1O75594 196 aaPredicted RBP6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 ATG12O94817 140 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 OR2A4O95047 310 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 LIPFP07098 398 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 OR8U9P0C7N5 309 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 RPA2P15927 270 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 F2RP25116 425 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 PPP1CCP36873 323 aaKnown RBP6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 ATP5J2P56134 94 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 SUPT4H1P63272 117 aaKnown RBP6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 CD83Q01151 205 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 FGL1Q08830 312 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 SLC9A3R2Q15599 337 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 AVPI1Q5T686 147 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 CLEC2AQ6UVW9 174 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 GSG1LQ6UXU4 331 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 LIAT1Q6ZQX7 453 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 TCF23Q7RTU1 214 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 TBC1D26Q86UD7 250 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 C8orf31Q8N9H6 132 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 UXS1Q8NBZ7 420 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 OR11H7Q8NGC8 314 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 OR5M8Q8NGP6 311 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 OR8U1Q8NH10 309 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 CD300LFQ8TDQ1 290 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 FAM168AQ92567 244 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 TNFRSF14Q92956 283 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 ST6GAL2Q96JF0 529 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 OR2A7Q96R45 310 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 HSD17B10Q99714 261 aaKnown RBP6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 ABHD14AQ9BUJ0 271 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 GSX2Q9BZM3 304 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 OR2D2Q9H210 308 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 CCL28Q9NRJ3 127 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 PIPOXQ9P0Z9 390 aa6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 SMG1Q96Q15 3661 aaKnown RBP6.71□□□□□ -1.34
TOPBP1-202ENST00000503338 KIAA2026Q5HYC2 2103 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 KMT2BQ9UMN6 2715 aaPredicted RBP6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 LOC105371242A0A075B767 164 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 A0A087X0M5 115 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 PPIAL4CA0A0B4J2A2 164 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 A0A1B0GX30 115 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 C17orf98A8MV24 154 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 M0R1W7 72 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 GOSR2O14653 212 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 RAB29O14966 203 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 PHF1O43189 567 aaPredicted RBP6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 LY6HO94772 140 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 IGHV4-39P01824 125 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 C1QBP02746 253 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 SERPINE2P07093 398 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 OR5AC1P0C628 307 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 PPIAL4GP0DN37 164 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 UCP1P25874 307 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 KIR2DS2P43631 304 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 GPR12P47775 334 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 SRSF4Q08170 494 aaKnown RBP6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 ZNF273Q14593 569 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 TMEM187Q14656 261 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 GNMTQ14749 295 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 ZFP69Q49AA0 526 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 ZNF787Q6DD87 383 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 ZNF295-AS1Q8N0V1 137 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 LINC00311Q8N616 119 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 LY6G5BQ8NDX9 201 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 UBALD1Q8TB05 177 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 ADTRPQ96IZ2 230 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 TMEM56Q96MV1 263 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 AGMATQ9BSE5 352 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 PDCD10Q9BUL8 212 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 TMEM222Q9H0R3 208 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 METTL8Q9H825 291 aaKnown RBP6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 RANGRFQ9HD47 186 aaPredicted RBP6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 BEX4Q9NWD9 120 aaPredicted RBP6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 PSG11Q9UQ72 335 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 TMED3Q9Y3Q3 217 aa6.7□□□□□ -1.34
TOPBP1-202ENST00000503338 SESN1Q9Y6P5 492 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms