RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 NQO2P16083 231 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 KIAA0141Q14154 515 aaPredicted RBP6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 CR1LQ2VPA4 569 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 C1orf87Q8N0U7 546 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 SCCPDHQ8NBX0 429 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 C1orf162Q8NEQ5 155 aaPredicted RBP6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 RNASEH2CQ8TDP1 164 aaKnown RBP6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 TAF15Q92804 592 aaKnown RBP eCLIP6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 C5orf30Q96GV9 206 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 GGACTQ9BVM4 153 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 MANBALQ9NQG1 85 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 SHANK1Q9Y566 2161 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 DOCK10Q96BY6 2186 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 ZNF729A6NN14 1252 aaPredicted RBP6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 CLDN34H7C241 214 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 PTBP3O95758 552 aaKnown RBP6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 MT-CO3P00414 261 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 TNFRSF9Q07011 255 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 CLN3Q13286 438 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 TBC1D28Q2M2D7 210 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 ADAM5Q6NVV9 412 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 MDP1Q86V88 176 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 THNSL2Q86YJ6 484 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 C1orf174Q8IYL3 243 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 GMPPAQ96IJ6 420 aaPredicted RBP6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 LOXL4Q96JB6 756 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 DOK5Q9P104 306 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 A0A096LPE4 126 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 A0A1W2PPZ6 126 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 IFNL4K9M1U5 179 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 TYMSP04818 313 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 OMGP23515 440 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 PDLIM4P50479 330 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 GNB2P62879 340 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 TMEM267Q0VDI3 215 aaPredicted RBP6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 TRAT1Q6PIZ9 186 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 ZNF66Q6ZN08 573 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 C1orf210Q8IVY1 113 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 SCGB1C1Q8TD33 95 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 RAB1CQ92928 201 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 TMEM147Q9BVK8 224 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 NCOR1P1Q9H4R4 102 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 CLCF1Q9UBD9 225 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 ZMAT5Q9UDW3 170 aaKnown RBP6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 NAT8Q9UHE5 227 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 LAMP3Q9UQV4 416 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 TNRC18O15417 2968 aaPredicted RBP6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 A0A0C4DFX4 3053 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 TRIOO75962 3097 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 RHBDL1O75783 438 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 KBTBD11O94819 623 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 TNFSF15O95150 251 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 IGHG3P01860 377 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 COX5AP20674 150 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 MEOX1P50221 254 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 IGFBP7Q16270 282 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 PLA2G2CQ5R387 149 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 FAM169BQ8N8A8 192 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 OR51H1Q8NH63 302 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 LURAP1Q96LR2 239 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 NIT2Q9NQR4 276 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 FOXJ2Q9P0K8 574 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 MIOXQ9UGB7 285 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 PRSS50Q9UI38 385 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 CTXND1A0A1B0GTU2 59 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 TMEM30CPA0ZSE6 113 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 KLRC4-KLRK1H3BQV0 150 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 SH2D1BO14796 132 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 VENTXO95231 258 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 CLDN14O95500 239 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 PFN1P07737 140 aaKnown RBP6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 KITLGP21583 273 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 SSX2Q16385 188 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 INO80CQ6PI98 192 aaPredicted RBP6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 C11orf53Q8IXP5 236 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 Q8N7P7 452 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 OR5R1Q8NH85 324 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 ZNF488Q96MN9 340 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 VSIRQ9H7M9 311 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 SRD5A3Q9H8P0 318 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 GAB2Q9UQC2 676 aa6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 SPENQ96T58 3664 aaKnown RBP6.07□□□□□ -1.44
LYSMD3-203ENST00000500869 MYO9BQ13459 2157 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 OOEPA6NGQ2 149 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 CCL2P13500 99 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 BRWD1-AS2P59051 145 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 PPP1CBP62140 327 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 SLC38A11Q08AI6 406 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 PYY3Q5JQD4 70 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 TMEM217Q8N7C4 229 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 TMEM105Q8N8V8 129 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 CIB3Q96Q77 187 aaPredicted RBP6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 OR4C12Q96R67 309 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 RSG1Q9BU20 258 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 RBKSQ9H477 322 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 TGIF2-C20orf24A0A0A6YYL0 155 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 SMCO3A2RU48 225 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 MAP1LC3B2A6NCE7 125 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 ARGFXA6NJG6 315 aa6.06□□□□□ -1.44
LYSMD3-203ENST00000500869 LRRC30A6NM36 301 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms