RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 PLPPR1Q8TBJ4 325 aa12.35□□□□□ -0.43
NEAT1-201ENST00000499732 Q8WTZ3 238 aa12.35□□□□□ -0.43
NEAT1-201ENST00000499732 GP6Q9HCN6 339 aa12.35□□□□□ -0.43
NEAT1-201ENST00000499732 ZNF71Q9NQZ8 489 aaPredicted RBP12.35□□□□□ -0.43
NEAT1-201ENST00000499732 SPENQ96T58 3664 aaKnown RBP12.35□□□□□ -0.43
NEAT1-201ENST00000499732 ZNF729A6NN14 1252 aaPredicted RBP12.34□□□□□ -0.43
NEAT1-201ENST00000499732 H0YL77 283 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 TGOLN2O43493 480 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 SLC25A6P12236 298 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 GLIPR1P48060 266 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 FGF12P61328 243 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 PDCD1Q15116 288 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 ZNF674Q2M3X9 581 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 CMTM1Q8IZ96 169 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 CYB561D1Q8N8Q1 229 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 GAR1Q9NY12 217 aaKnown RBP12.34□□□□□ -0.43
NEAT1-201ENST00000499732 DOK5Q9P104 306 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 CLCF1Q9UBD9 225 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 BOD1L1Q8NFC6 3051 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 DOCK7Q96N67 2140 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 ELOA3CA0A087WX78 387 aaPredicted RBP12.34□□□□□ -0.43
NEAT1-201ENST00000499732 A0A096LPE4 126 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 LOC102723971A0A1B0GUV8 181 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 A0A1W2PPZ6 126 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 SEC14L6B5MCN3 397 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 NPBWR2P48146 333 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 PNRC1Q12796 327 aaPredicted RBP12.34□□□□□ -0.43
NEAT1-201ENST00000499732 KRTCAP3Q53RY4 240 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 COLCA1Q6ZS62 124 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 STX12Q86Y82 276 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 MAGT1Q9H0U3 335 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 PRSS50Q9UI38 385 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 RNF115Q9Y4L5 304 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 MMP24Q9Y5R2 645 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 RFNGQ9Y644 331 aa12.34□□□□□ -0.43
NEAT1-201ENST00000499732 ZNF727A8MUV8 499 aa12.33□□□□□ -0.44
NEAT1-201ENST00000499732 ZNHIT1O43257 154 aa12.33□□□□□ -0.44
NEAT1-201ENST00000499732 CST7O76096 145 aa12.33□□□□□ -0.44
NEAT1-201ENST00000499732 YIF1AO95070 293 aa12.33□□□□□ -0.44
NEAT1-201ENST00000499732 TMEM50AO95807 157 aa12.33□□□□□ -0.44
NEAT1-201ENST00000499732 CXCL1P09341 107 aa12.33□□□□□ -0.44
NEAT1-201ENST00000499732 WNT2P09544 360 aa12.33□□□□□ -0.44
NEAT1-201ENST00000499732 EPHA1P21709 976 aa12.33□□□□□ -0.44
NEAT1-201ENST00000499732 S100GP29377 79 aa12.33□□□□□ -0.44
NEAT1-201ENST00000499732 RPL23AP62750 156 aaKnown RBP12.33□□□□□ -0.44
NEAT1-201ENST00000499732 DNLZQ5SXM8 178 aa12.33□□□□□ -0.44
NEAT1-201ENST00000499732 FAM180AQ6UWF9 173 aa12.33□□□□□ -0.44
NEAT1-201ENST00000499732 CPEB3Q8NE35 698 aaKnown RBP12.33□□□□□ -0.44
NEAT1-201ENST00000499732 GTF3AQ92664 365 aaKnown RBP12.33□□□□□ -0.44
NEAT1-201ENST00000499732 C12orf49Q9H741 205 aa12.33□□□□□ -0.44
NEAT1-201ENST00000499732 TMEM242Q9NWH2 141 aa12.33□□□□□ -0.44
NEAT1-201ENST00000499732 TREM2Q9NZC2 230 aa12.33□□□□□ -0.44
NEAT1-201ENST00000499732 ATP23Q9Y6H3 246 aa12.33□□□□□ -0.44
NEAT1-201ENST00000499732 ZNF503-AS2A6NEH8 195 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 IFITM10A6NMD0 228 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 AHRRA9YTQ3 701 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 CHST1O43916 411 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 SS18L1O75177 396 aaPredicted RBP12.32□□□□□ -0.44
NEAT1-201ENST00000499732 BCL3P20749 454 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 NDUFA6P56556 154 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 ERVFRD-1P60508 538 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 HLA-DRB3P79483 266 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 RUNX1Q01196 453 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 HERPUD1Q15011 391 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 ACSF3Q4G176 576 aaPredicted RBP12.32□□□□□ -0.44
NEAT1-201ENST00000499732 PYY3Q5JQD4 70 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 OR2B11Q5JQS5 317 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 LINC00596Q86U02 117 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 H1FOOQ8IZA3 346 aaPredicted RBP12.32□□□□□ -0.44
NEAT1-201ENST00000499732 GMPPAQ96IJ6 420 aaPredicted RBP12.32□□□□□ -0.44
NEAT1-201ENST00000499732 RIMS4Q9H426 269 aaPredicted RBP12.32□□□□□ -0.44
NEAT1-201ENST00000499732 IGKV1D-13A0A0B4J2D9 117 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 IFNA5P01569 189 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 HLA-HP01893 362 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 SCTP09683 121 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 IGKV1-13P0DP09 117 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 CEBPGP53567 150 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 PAX9P55771 341 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 ZNF154Q13106 437 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 ZNF343Q6P1L6 599 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 P4HA3Q7Z4N8 544 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 TMEM217Q8N7C4 229 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 RAB40CQ96S21 281 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 CISD1Q9NZ45 108 aaKnown RBP12.32□□□□□ -0.44
NEAT1-201ENST00000499732 TAAR3PQ9P1P4 343 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 RNF150Q9ULK6 438 aa12.32□□□□□ -0.44
NEAT1-201ENST00000499732 TRBV6-6A0A0A6YYG2 114 aa12.31□□□□□ -0.44
NEAT1-201ENST00000499732 A0A1B0GU03 582 aa12.31□□□□□ -0.44
NEAT1-201ENST00000499732 HIST1H2BKO60814 126 aa12.31□□□□□ -0.44
NEAT1-201ENST00000499732 HIST1H2BJP06899 126 aa12.31□□□□□ -0.44
NEAT1-201ENST00000499732 HIST1H2BOP23527 126 aa12.31□□□□□ -0.44
NEAT1-201ENST00000499732 HIST1H2BBP33778 126 aa12.31□□□□□ -0.44
NEAT1-201ENST00000499732 RND2P52198 227 aa12.31□□□□□ -0.44
NEAT1-201ENST00000499732 HIST1H2BDP58876 126 aa12.31□□□□□ -0.44
NEAT1-201ENST00000499732 CD81P60033 236 aa12.31□□□□□ -0.44
NEAT1-201ENST00000499732 HIST1H2BCP62807 126 aa12.31□□□□□ -0.44
NEAT1-201ENST00000499732 TLE1Q04724 770 aa12.31□□□□□ -0.44
NEAT1-201ENST00000499732 HIST2H2BEQ16778 126 aa12.31□□□□□ -0.44
NEAT1-201ENST00000499732 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.31□□□□□ -0.44
NEAT1-201ENST00000499732 FBXW9Q5XUX1 488 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms