RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 DDTP30046 118 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 PKIAP61925 76 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 DCAF10Q5QP82 559 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 ZNF787Q6DD87 383 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 REC114Q7Z4M0 266 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 ZDHHC23Q8IYP9 409 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 GPR146Q96CH1 333 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 RCC1LQ96I51 464 aaKnown RBP13.93□□□□□ -0.18
COL6A1-206ENST00000498614 H0Y980 276 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 OR8G1Q15617 311 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 DNLZQ5SXM8 178 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 CA5BP1Q8WTZ4 195 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 SDF2L1Q9HCN8 221 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 TMEM242Q9NWH2 141 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 ABI3Q9P2A4 366 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 SSTP61278 116 aa13.92□□□□□ -0.18
COL6A1-206ENST00000498614 PNRC1Q12796 327 aaPredicted RBP13.92□□□□□ -0.18
COL6A1-206ENST00000498614 SSX9Q7RTT3 188 aa13.92□□□□□ -0.18
COL6A1-206ENST00000498614 Q8NFD4 153 aa13.92□□□□□ -0.18
COL6A1-206ENST00000498614 APH1AQ96BI3 265 aa13.92□□□□□ -0.18
COL6A1-206ENST00000498614 OR51B6Q9H340 312 aa13.92□□□□□ -0.18
COL6A1-206ENST00000498614 ZNF552Q9H707 407 aaPredicted RBP13.92□□□□□ -0.18
COL6A1-206ENST00000498614 MTCH1Q9NZJ7 389 aa13.92□□□□□ -0.18
COL6A1-206ENST00000498614 MED13Q9UHV7 2174 aa13.92□□□□□ -0.18
COL6A1-206ENST00000498614 A0A087X0M5 115 aa13.91□□□□□ -0.18
COL6A1-206ENST00000498614 A0A1B0GX30 115 aa13.91□□□□□ -0.18
COL6A1-206ENST00000498614 KIAA1324LA8MWY0 1029 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-206ENST00000498614 C3orf80F5H4A9 247 aa13.91□□□□□ -0.18
COL6A1-206ENST00000498614 IL2RGP31785 369 aa13.91□□□□□ -0.18
COL6A1-206ENST00000498614 CEACAM21Q3KPI0 293 aa13.91□□□□□ -0.18
COL6A1-206ENST00000498614 NUFIP2Q7Z417 695 aaKnown RBP13.91□□□□□ -0.18
COL6A1-206ENST00000498614 NEK7Q8TDX7 302 aa13.91□□□□□ -0.18
COL6A1-206ENST00000498614 APOBEC3DQ96AK3 386 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-206ENST00000498614 CABLES2Q9BTV7 478 aa13.91□□□□□ -0.18
COL6A1-206ENST00000498614 SYNGR1O43759 233 aa13.91□□□□□ -0.18
COL6A1-206ENST00000498614 FGF12P61328 243 aa13.91□□□□□ -0.18
COL6A1-206ENST00000498614 ARL16Q0P5N6 197 aa13.91□□□□□ -0.18
COL6A1-206ENST00000498614 SRSF7Q16629 238 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL6A1-206ENST00000498614 Q6ZRM9 215 aa13.91□□□□□ -0.18
COL6A1-206ENST00000498614 IL22RA2Q969J5 263 aa13.91□□□□□ -0.18
COL6A1-206ENST00000498614 IL17BQ9UHF5 180 aa13.91□□□□□ -0.18
COL6A1-206ENST00000498614 DOCK7Q96N67 2140 aa13.91□□□□□ -0.18
COL6A1-206ENST00000498614 TRBV24-1A0A075B6N3 115 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 F2RP25116 425 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 RNPS1Q15287 305 aaKnown RBP13.9□□□□□ -0.18
COL6A1-206ENST00000498614 OR51H1Q8NH63 302 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 SCGB1C1Q8TD33 95 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 ZNF488Q96MN9 340 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 GPR87Q9BY21 358 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 CDH20Q9HBT6 801 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 SMCO3A2RU48 225 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 FAM90A10PA6NDY2 464 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 FAM90A18PA6NE21 464 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 FAM90A16PA6NEW6 464 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 FAM90A20PA6NIJ5 464 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 FAM90A8PA6NJQ4 464 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 FAM90A7PA6NKC0 464 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 FAM90A22PA8MWA6 464 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 FAM90A12PA8MX19 464 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 FAM90A5PA8MXJ8 464 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 FAM90A23PA8MXZ1 464 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 TSTD3H0UI37 97 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 TRAPPC2LH3BP13 241 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 LILRA1O75019 489 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 CD55P08174 381 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 FAM90A15PP0C7V4 464 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 FAM90A13PP0C7W8 464 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 FAM90A14PP0C7W9 464 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 FAM90A24PP0C7X0 464 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 CD81P60033 236 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 DMRTC2Q8IXT2 367 aaPredicted RBP13.9□□□□□ -0.18
COL6A1-206ENST00000498614 OR4X1Q8NH49 305 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 MBD3L1Q8WWY6 194 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 POM121L2Q96KW2 1035 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 C12orf49Q9H741 205 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 OR14J1Q9UGF5 321 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 PRSS50Q9UI38 385 aa13.9□□□□□ -0.18
COL6A1-206ENST00000498614 TGOLN2O43493 480 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 IAPPP10997 89 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 PSG2P11465 335 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 MEOX1P50221 254 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 SRSF6Q13247 344 aaKnown RBP13.89□□□□□ -0.19
COL6A1-206ENST00000498614 PCSK4Q6UW60 755 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 FAM180AQ6UWF9 173 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 C20orf204Q6ZNR8 217 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 MCEMP1Q8IX19 187 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 PITPNC1Q9UKF7 332 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 ATP23Q9Y6H3 246 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 KIR2DS1A0A191URI9 304 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 CEBPZOSA8MTT3 80 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 C21orf140B9A014 251 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 OPN1MWP04001 364 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 METTL15P1P0C7V9 234 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 OPN1MW2P0DN77 364 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 OPN1MW3P0DN78 364 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 COX5BP10606 129 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 PLA2G5P39877 138 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 KIR2DS4P43632 304 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 KIR2DS1Q14954 304 aa13.89□□□□□ -0.19
COL6A1-206ENST00000498614 IGFBP7Q16270 282 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms