RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 HCP5Q6MZN7 132 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 LYG1Q8N1E2 194 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 OR2AK2Q8NG84 335 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 OR11H6Q8NGC7 330 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 OR5AP2Q8NGF4 316 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 SNAPC3Q92966 411 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 YPEL2Q96QA6 119 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 THAP7Q9BT49 309 aaPredicted RBP9.32□□□□□ -0.92
CTTN-208ENST00000498223 CABLES2Q9BTV7 478 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 ABHD14AQ9BUJ0 271 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 RDH8Q9NYR8 311 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 COL6A5A8TX70 2615 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 A0A087X0M5 115 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 TRBV6-7A0A0A0MS04 114 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 IGKV1-6A0A0C4DH72 117 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 A0A1B0GX30 115 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 M0QYG6 137 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 SLC31A2O15432 143 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 GSTZ1O43708 216 aaPredicted RBP9.31□□□□□ -0.92
CTTN-208ENST00000498223 DIRAS3O95661 229 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 CSF1P09603 554 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 OR5H8P0DN80 308 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 NAT1P18440 290 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 NFYAP23511 347 aaPredicted RBP9.31□□□□□ -0.92
CTTN-208ENST00000498223 HRH1P35367 487 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 CEACAM3P40198 252 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 RFX2P48378 723 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 RAB7AP51149 207 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 TAS2R19P59542 299 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 HERV-K104P61576 105 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 SSBP1Q04837 148 aaKnown RBP9.31□□□□□ -0.92
CTTN-208ENST00000498223 ZNF846Q147U1 533 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 ZNF79Q15937 498 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 HLA-DRB5Q30154 266 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 Q3ZCU0 254 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 MIDNQ504T8 468 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 ACTBL2Q562R1 376 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 RNASE10Q5GAN6 216 aaKnown RBP9.31□□□□□ -0.92
CTTN-208ENST00000498223 UTF1Q5T230 341 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 TRIQKQ629K1 86 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 ZNF626Q68DY1 528 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 ZNF57Q68EA5 555 aaPredicted RBP9.31□□□□□ -0.92
CTTN-208ENST00000498223 LINC00299Q6ZSB3 139 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 LYSMD2Q8IV50 215 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 BCL6BQ8N143 479 aaPredicted RBP9.31□□□□□ -0.92
CTTN-208ENST00000498223 GDPD1Q8N9F7 314 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 TMEM229BQ8NBD8 167 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 EDARADDQ8WWZ3 215 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 ZDHHC16Q969W1 377 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 CREB3L1Q96BA8 519 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 SRRQ9GZT4 340 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 MMP28Q9H239 520 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 OCEL1Q9H607 264 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 TAS2R8Q9NYW2 309 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 ZNRD1Q9P1U0 126 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 ZNF221Q9UK13 617 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 ANAPC10Q9UM13 185 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 TBL2Q9Y4P3 447 aaKnown RBP9.31□□□□□ -0.92
CTTN-208ENST00000498223 HILPDAQ9Y5L2 63 aa9.31□□□□□ -0.92
CTTN-208ENST00000498223 STAB1Q9NY15 2570 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 A0A0U1RQK1 487 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 ODF3BA8MYP8 253 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 LEUTXA8MZ59 168 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 ST8SIA5O15466 376 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 RAB3DO95716 219 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 FSHBP01225 129 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 CD3DP04234 171 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 OR8U9P0C7N5 309 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 FCGR2CP31995 323 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 SSX2Q16385 188 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 PLA1AQ53H76 456 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 CT45A1Q5HYN5 189 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 MINOS1Q5TGZ0 78 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 RBMS3Q6XE24 437 aaKnown RBP9.3□□□□□ -0.92
CTTN-208ENST00000498223 LHFPL4Q7Z7J7 247 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 H1FOOQ8IZA3 346 aaPredicted RBP9.3□□□□□ -0.92
CTTN-208ENST00000498223 TOMM5Q8N4H5 51 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 PIP4P2Q8N4L2 257 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 BEND2Q8NDZ0 799 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 OR8U1Q8NH10 309 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 CT45A3Q8NHU0 189 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 TOMM40LQ969M1 308 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 RPEQ96AT9 228 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 WDR12Q9GZL7 423 aaKnown RBP9.3□□□□□ -0.92
CTTN-208ENST00000498223 C11orf54Q9H0W9 315 aaPredicted RBP9.3□□□□□ -0.92
CTTN-208ENST00000498223 AKIP1Q9NQ31 210 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 DPM3Q9P2X0 92 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 RNF150Q9ULK6 438 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 SOX21Q9Y651 276 aaPredicted RBP9.3□□□□□ -0.92
CTTN-208ENST00000498223 MINOS1-NBL1R4GNA1 71 aa9.3□□□□□ -0.92
CTTN-208ENST00000498223 ANK3Q12955 4377 aaKnown RBP9.3□□□□□ -0.92
CTTN-208ENST00000498223 FBN3Q75N90 2809 aa9.29□□□□□ -0.92
CTTN-208ENST00000498223 LINC00854A0A1B0GVQ3 168 aa9.29□□□□□ -0.92
CTTN-208ENST00000498223 BUB1B-PAK6H3BSN5 160 aa9.29□□□□□ -0.92
CTTN-208ENST00000498223 LANCL1O43813 399 aa9.29□□□□□ -0.92
CTTN-208ENST00000498223 IGLV1-47P01700 117 aa9.29□□□□□ -0.92
CTTN-208ENST00000498223 FBP1P09467 338 aa9.29□□□□□ -0.92
CTTN-208ENST00000498223 AKAIN1P0CW23 69 aa9.29□□□□□ -0.92
CTTN-208ENST00000498223 GPR12P47775 334 aa9.29□□□□□ -0.92
CTTN-208ENST00000498223 LUMP51884 338 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms