RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 TGFBR3Q03167 851 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 ZNF90Q03938 601 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 ATP6V1FQ16864 119 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 NEIL1Q96FI4 390 aaPredicted RBP11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 LAMTOR2Q9Y2Q5 125 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 MDFIC2A0A1B0GVS7 189 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 NKX6-3A6NJ46 265 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 C11orf94C9JXX5 98 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 TEX43Q6ZNM6 134 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 Q6ZPA2 131 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 MRPL13Q9BYD1 178 aaKnown RBP11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 RALGAPA1Q6GYQ0 2036 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 CACNA1EQ15878 2313 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 FRYQ5TBA9 3013 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 NDUFB4O95168 129 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 IGKV3-11P04433 115 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 NTF3P20783 257 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 CCL1P22362 96 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 AMTP48728 403 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 BLKP51451 505 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 ZP4Q12836 540 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 MAJINQ3KP22 176 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 KIAA1644Q3SXP7 199 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 TMEM240Q5SV17 173 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 TMEM92Q6UXU6 159 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 OR10G9Q8NGN4 311 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 OR10G7Q8NGN6 311 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 TMEM56Q96MV1 263 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 ZNF703Q9H7S9 590 aaPredicted RBP11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 PXMP4Q9Y6I8 212 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 TMEM56-RWDD3S4R434 201 aa11.19□□□□□ -0.62
GAPVD1-220ENST00000497580 SYNGR2O43760 224 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 PDCD6O75340 191 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 KITLGP21583 273 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 KLF3P57682 345 aaPredicted RBP11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 Q6ZRM9 215 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 PCED1AQ9H1Q7 454 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 ZNF586Q9NXT0 402 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 RNF115Q9Y4L5 304 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 RNF114Q9Y508 228 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 A0A1W2PQF6 199 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 ITGB1BP1O14713 200 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 NAPSAO96009 420 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 KIR2DL1P43626 348 aaPredicted RBP11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 SLC38A11Q08AI6 406 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 HLA-BQ31612 363 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 PLCXD3Q63HM9 321 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 FBXL7Q9UJT9 491 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 RPL15P61313 204 aaKnown RBP11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 SHBQ15464 509 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 ACSM6Q6P461 480 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 SYT13Q7L8C5 426 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 TAF15Q92804 592 aaKnown RBP eCLIP11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 OR6C1Q96RD1 312 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 KCNS2Q9ULS6 477 aa11.18□□□□□ -0.62
GAPVD1-220ENST00000497580 SLC22A20A6NK97 555 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 FCN1O00602 326 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 EFNA2O43921 213 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 GDF9O60383 454 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 IER3P46695 156 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 NPBWR2P48146 333 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 FAM69BQ5VUD6 431 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 SAXO1Q8IYX7 474 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 SLC22A18ASQ8N1D0 253 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 GJC3Q8NFK1 279 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 PPP1R3CQ9UQK1 317 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 TRAV39A0A0B4J263 110 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 IGHV5-51A0A0C4DH38 117 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 A0A1W2PQD3 144 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 SIRPB1O00241 398 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 TRAF3IP2O43734 574 aaPredicted RBP11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 SLC35B1P78383 322 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 HAPLN4Q86UW8 402 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 ZNF114Q8NC26 417 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 PINX1Q96BK5 328 aaKnown RBP11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 ZNF501Q96CX3 271 aaPredicted RBP11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 RAB40CQ96S21 281 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 WDR61Q9GZS3 305 aaKnown RBP11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 FREM2Q5SZK8 3169 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 DOCK7Q96N67 2140 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 C3orf80F5H4A9 247 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 SLC17A3O00476 420 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 TLX3O43711 291 aaPredicted RBP11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 TMEM11P17152 192 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 MSR1P21757 451 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 ATP5G3P48201 142 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 SOX8P57073 446 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 ADPRHL1Q8NDY3 354 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 ZNF738Q8NE65 137 aa11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 MRPL18Q9H0U6 180 aaKnown RBP11.17□□□□□ -0.62
GAPVD1-220ENST00000497580 ADAMTS9Q9P2N4 1935 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 TMEM250H0YL14 139 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 RBMXL2O75526 392 aaKnown RBP11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 NRASP01111 189 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 CNN3Q15417 329 aaKnown RBP11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 LRRC75BQ2VPJ9 315 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 SPINK9Q5DT21 86 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 LDLRAD2Q5SZI1 272 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 SLC25A47Q6Q0C1 308 aa11.16□□□□□ -0.62
GAPVD1-220ENST00000497580 UQCR10Q9UDW1 63 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms