RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 MRPS21P82921 87 aaKnown RBP4.4□□□□□ -1.71
BRCA1-224ENST00000497488 TNFRSF9Q07011 255 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 TRMT12Q53H54 448 aaKnown RBP4.4□□□□□ -1.71
BRCA1-224ENST00000497488 ACSBG2Q5FVE4 666 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 ZNF684Q5T5D7 378 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 CEMP1Q6PRD7 247 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-224ENST00000497488 IGFL2Q6UWQ7 119 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 Q6ZSR6 202 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 NEGR1Q7Z3B1 354 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 GALNT10Q86SR1 603 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 ZNF676Q8N7Q3 588 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 SLC35G3Q8N808 338 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 DCUN1D4Q92564 292 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 SIGMAR1Q99720 223 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 ZNF649Q9BS31 505 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 EBPLQ9BY08 206 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 HHLA2Q9UM44 414 aa4.4□□□□□ -1.71
BRCA1-224ENST00000497488 C14orf166Q9Y224 244 aaKnown RBP4.4□□□□□ -1.71
BRCA1-224ENST00000497488 A0A1B0GV72 72 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 ZNF705GA8MUZ8 300 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-224ENST00000497488 KLLNB2CW77 178 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 KRBOX1C9JBD0 128 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 LAD1O00515 517 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 NOS1APO75052 506 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-224ENST00000497488 SUPT7LO94864 414 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 IGHV3-13P01766 116 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 MEOX2P50222 304 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 CDK9P50750 372 aaKnown RBP4.39□□□□□ -1.71
BRCA1-224ENST00000497488 NANOS3P60323 173 aaKnown RBP4.39□□□□□ -1.71
BRCA1-224ENST00000497488 RAB4BP61018 213 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 GRB2P62993 217 aaKnown RBP4.39□□□□□ -1.71
BRCA1-224ENST00000497488 MS4A2Q01362 244 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 EMX1Q04741 257 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-224ENST00000497488 PAFAH1B3Q15102 231 aaKnown RBP4.39□□□□□ -1.71
BRCA1-224ENST00000497488 Q1RN00 199 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 LIN52Q52LA3 116 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 CLLU1OSQ5K130 101 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 SLC25A30Q5SVS4 291 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 FAM71E1Q6IPT2 247 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 ZNF544Q6NX49 715 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 GLT6D1Q7Z4J2 308 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 PRNTQ86SH4 94 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 SLC25A45Q8N413 288 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 OR2Z1Q8NG97 314 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 PPTC7Q8NI37 304 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 SLC35B4Q969S0 331 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 FXYD5Q96DB9 178 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 LINC00479Q96M42 142 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 LINC01587Q99440 93 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 HSD17B10Q99714 261 aaKnown RBP4.39□□□□□ -1.71
BRCA1-224ENST00000497488 MED18Q9BUE0 208 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 ZNF717Q9BY31 904 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-224ENST00000497488 SLC17A9Q9BYT1 436 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 DCSTAMPQ9H295 470 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 ZSCAN16Q9H4T2 348 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-224ENST00000497488 UBQLN4Q9NRR5 601 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 GLS2Q9UI32 602 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 KLF13Q9Y2Y9 288 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-224ENST00000497488 MOB4Q9Y3A3 225 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 PRELID3BQ9Y3B1 194 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 YTHDF2Q9Y5A9 579 aaKnown RBP4.39□□□□□ -1.71
BRCA1-224ENST00000497488 SZT2Q5T011 3432 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 PDE4DIPQ5VU43 2346 aa4.39□□□□□ -1.71
BRCA1-224ENST00000497488 SCN10AQ9Y5Y9 1956 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 TRAV19A0A0A6YYK7 116 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 NDUFC2-KCTD14E9PQ53 114 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 ZNF354AO60765 605 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-224ENST00000497488 CCNE2O96020 404 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 ATP5G1P05496 136 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 FOLR2P14207 255 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 CRISP2P16562 243 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 OMGP23515 440 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 PRTN3P24158 256 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 MEF2CQ06413 473 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-224ENST00000497488 PYCR3Q53H96 274 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 ELP2Q6IA86 826 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 SCGB1D4Q6XE38 83 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 CLEC20AQ6ZU45 233 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 MDP1Q86V88 176 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 C1orf158Q8N1D5 194 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 ZIC4Q8N9L1 334 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 OR2M7Q8NG81 312 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 OR10G4Q8NGN3 311 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 ABHD3Q8WU67 409 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 PTX4Q96A99 478 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 ZBTB9Q96C00 473 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 TMEM101Q96IK0 257 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 BTF3L4Q96K17 158 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 C18orf15Q96N68 181 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 OR2V2Q96R30 315 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 DDA1Q9BW61 102 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 PARP11Q9NR21 331 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 SLC7A10Q9NS82 523 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 ARMC1Q9NVT9 282 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 DEC1Q9P2X7 70 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 OR12D3Q9UGF7 316 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 DOCK5Q9H7D0 1870 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 VWA8A3KMH1 1905 aa4.38□□□□□ -1.71
BRCA1-224ENST00000497488 EYSQ5T1H1 3165 aa4.37□□□□□ -1.71
BRCA1-224ENST00000497488 H7C423 109 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms