RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 PRELID2Q8N945 189 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 SUMF2Q8NBJ7 301 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 OR51A2Q8NGJ7 313 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 RXFP2Q8WXD0 754 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 MUCL1Q96DR8 90 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 ZMYND19Q96E35 227 aaPredicted RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 KAZALD1Q96I82 304 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 OR2A7Q96R45 310 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 HSD17B10Q99714 261 aaKnown RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 WDR61Q9GZS3 305 aaKnown RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM133Q9H2Q1 129 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 TXNL4BQ9NX01 149 aaKnown RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 C1RLQ9NZP8 487 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 FAM30AQ9NZY2 134 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 KLHL13Q9P2N7 655 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 KLK11Q9UBX7 282 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 SHPKQ9UHJ6 478 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 PIK3C2BO00750 1634 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 ABCA3Q99758 1704 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 ZSWIM8A7E2V4 1837 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 CHD3Q12873 2000 aaKnown RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 LAMB4A4D0S4 1761 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 C3P01024 1663 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 IQGAP1P46940 1657 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 PRG4Q92954 1404 aaPredicted RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 A0A087WWC5 75 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 DUXBA0A1W2PPF3 345 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 A1L4Q6 167 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 OR2M5A3KFT3 312 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 GGT3PA6NGU5 568 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 LILRA5A6NI73 299 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM150CB9EJG8 249 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 SPRY2O43597 315 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 ATP5LO75964 103 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 CA1P00915 261 aaPredicted RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 TRGC2P03986 189 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 CATP04040 527 aaKnown RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 CTSEP14091 401 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 GPD1P21695 349 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 SDC2P34741 201 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 HINT1P49773 126 aaPredicted RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 KLK7P49862 253 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 TPPP2P59282 170 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 UBE2NP61088 152 aaKnown RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 RPS23P62266 143 aaKnown RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 PSG9Q00887 426 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 PIGFQ07326 219 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 TCF15Q12870 199 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 GSG1Q2KHT4 349 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 C1orf189Q5VU69 101 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 PAQR6Q6TCH4 344 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 PQLC2Q6ZP29 291 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 Q6ZVH6 145 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 MOB3BQ86TA1 216 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 C9orf40Q8IXQ3 194 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 IQCF1Q8N6M8 205 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 RBMXL3Q8N7X1 1067 aaKnown RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF740Q8NDX6 193 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 OR2T33Q8NG76 320 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 OR8B12Q8NGG6 310 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 CRYGNQ8WXF5 182 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 FRZBQ92765 325 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 VOPP1Q96AW1 172 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 LRRC61Q9BV99 259 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF471Q9BX82 626 aaPredicted RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 IKZF5Q9H5V7 419 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 NPVFQ9HCQ7 196 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM9BQ9NQ34 198 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 PRTFDC1Q9NRG1 225 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM100Q9NV29 134 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 HRASLS2Q9NWW9 162 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 FUT9Q9Y231 359 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 PKIGQ9Y2B9 76 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 TANC1Q9C0D5 1861 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 PPLO60437 1756 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 A0A0A0MQY5 61 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 IGHV2-26A0A0B4J1V2 119 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 LOC102725191A0A1B0GVB3 256 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 A6NDN8 102 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM212A6NML5 194 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 F5H5P2 479 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 CCDC179H3BU77 68 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 K7EP34 96 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 CHEK1O14757 476 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 BCL2L11O43521 198 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 CD5LO43866 347 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 ZIC3O60481 467 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 TBL1XO60907 577 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 GRAP2O75791 330 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 IGLV2-14P01704 120 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 BCKDHAP12694 445 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 CD99P14209 185 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 HIST1H1DP16402 221 aaKnown RBP2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 FCARP24071 287 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 CTGFP29279 349 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 DIO3P55073 304 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 MRPS6P82932 125 aaKnown RBP2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 CATR1Q13166 79 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF542PQ5EBM4 170 aa2.59□□□□□ -1.99
SNRNP48-202ENST00000496946 DCAF12Q5T6F0 453 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms