RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 DMBX1Q8NFW5 382 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 OR5T2Q8NGG2 359 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 OR8B12Q8NGG6 310 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 OR52H1Q8NGJ2 320 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 OR51G2Q8NGK0 314 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 OR6N2Q8NGY6 317 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 OR2T6Q8NHC8 308 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 H1FXQ92522 213 aaKnown RBP3.32□□□□□ -1.88
VPS52-222ENST00000495981 PINX1Q96BK5 328 aaKnown RBP3.32□□□□□ -1.88
VPS52-222ENST00000495981 SGK3Q96BR1 496 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 NRBF2Q96F24 287 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 DUS3LQ96G46 650 aaKnown RBP3.32□□□□□ -1.88
VPS52-222ENST00000495981 UQCC2Q9BRT2 126 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 RTL8AQ9BWD3 113 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 CDCA4Q9BXL8 241 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 RGCCQ9H4X1 137 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 MED20Q9H944 212 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 HES4Q9HCC6 221 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 RAB18Q9NP72 206 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 IL1RAPQ9NPH3 570 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 FKBP14Q9NWM8 211 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 DNAJC27Q9NZQ0 273 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 MBD2Q9UBB5 411 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 PAIP2BQ9ULR5 123 aaKnown RBP3.32□□□□□ -1.88
VPS52-222ENST00000495981 LRP1BQ9NZR2 4599 aa3.32□□□□□ -1.88
VPS52-222ENST00000495981 OR5B21A6NL26 309 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 FAM183AA6NL82 134 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 ZNF850A8MQ14 1090 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 H3BTX0 84 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 NDUFAB1O14561 156 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 AKR7A2O43488 359 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 ZNF737O75373 536 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 SRSF10O75494 262 aaKnown RBP3.31□□□□□ -1.88
VPS52-222ENST00000495981 NXPH2O95156 264 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 FABP3P05413 133 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 PSG2P11465 335 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 ZNF823P16415 610 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 SLC2A5P22732 501 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 CFL1P23528 166 aaKnown RBP3.31□□□□□ -1.88
VPS52-222ENST00000495981 COX7A1P24310 79 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 RANBP1P43487 201 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 DYNLT3P51808 116 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 PSME3P61289 254 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 B2MP61769 119 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 EGFEM1PQ0D2K5 195 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 PJVKQ0ZLH3 352 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 DYNC1I2Q13409 638 aaKnown RBP3.31□□□□□ -1.88
VPS52-222ENST00000495981 EIF2B1Q14232 305 aaKnown RBP3.31□□□□□ -1.88
VPS52-222ENST00000495981 NSUN5P1Q3KNT7 163 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 KIAA1644Q3SXP7 199 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 DMKNQ6E0U4 476 aaPredicted RBP3.31□□□□□ -1.88
VPS52-222ENST00000495981 AWAT2Q6E213 333 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 RASSF6Q6ZTQ3 369 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 SMIM29Q86T20 159 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 ERI1Q8IV48 349 aaKnown RBP3.31□□□□□ -1.88
VPS52-222ENST00000495981 CD177Q8N6Q3 437 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 GVQW1Q8N7I0 195 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 AQP11Q8NBQ7 271 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 POC1AQ8NBT0 407 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 OR4S1Q8NGB4 309 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 OR5AP2Q8NGF4 316 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 OR52L1Q8NGH7 329 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 OR5D13Q8NGL4 314 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 OR6K6Q8NGW6 343 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 OTOSQ8NHW6 89 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 GNPDA2Q8TDQ7 276 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 AQP3Q92482 292 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 PYURFQ96I23 114 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 PRAC1Q96KF2 57 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 ZNF488Q96MN9 340 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 NKX3-1Q99801 234 aaPredicted RBP3.31□□□□□ -1.88
VPS52-222ENST00000495981 MICU1Q9BPX6 476 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 HOPXQ9BPY8 73 aaPredicted RBP3.31□□□□□ -1.88
VPS52-222ENST00000495981 NRIP2Q9BQI9 281 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 DGCR6LQ9BY27 220 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 GPR61Q9BZJ8 451 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 OR51I2Q9H344 312 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 ABCB9Q9NP78 766 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 CMC2Q9NRP2 79 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 FAM206AQ9NX38 181 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 ZNF391Q9UJN7 358 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 FAM32AQ9Y421 112 aaKnown RBP3.31□□□□□ -1.88
VPS52-222ENST00000495981 MPC1Q9Y5U8 109 aa3.31□□□□□ -1.88
VPS52-222ENST00000495981 APOBP04114 4563 aaKnown RBP3.31□□□□□ -1.88
VPS52-222ENST00000495981 ARRDC5A6NEK1 342 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 CCDC182A6NF36 153 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 C17orf98A8MV24 154 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 J3QT63 122 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 ZNF593O00488 134 aaPredicted RBP3.3□□□□□ -1.88
VPS52-222ENST00000495981 SYNGR1O43759 233 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 RBP4P02753 201 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 ZNF735P0CB33 412 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 PGA5P0DJD9 388 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 ZNF3P17036 446 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 HSD11B1P28845 292 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 FMO3P31513 532 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 NAA10P41227 235 aaPredicted RBP3.3□□□□□ -1.88
VPS52-222ENST00000495981 GPM6AP51674 278 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 SMIM11AP58511 58 aa3.3□□□□□ -1.88
VPS52-222ENST00000495981 NANOS2P60321 138 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms