RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 CD40LGP29965 261 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 MDH2P40926 338 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 OR3A1P47881 315 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 PDLIM4P50479 330 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 PPP5CP53041 499 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 TMEM33P57088 247 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 GNG2P59768 71 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 PITPNAQ00169 270 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 ARFRP1Q13795 201 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 ZNF846Q147U1 533 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 DEFB113Q30KQ7 82 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 ODF3L2Q3SX64 289 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 PXDC1Q5TGL8 231 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 HACD4Q5VWC8 232 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 PYHIN1Q6K0P9 492 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 C17orf107Q6ZR85 190 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 Q6ZSV7 163 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 MUC20Q8N307 709 aaPredicted RBP4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 TPRX1Q8N7U7 411 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 TMEM185AQ8NFB2 350 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 OR52I2Q8NH67 350 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 NEK7Q8TDX7 302 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 MAFIPQ8WZ33 124 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 RAB1CQ92928 201 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 SDSLQ96GA7 329 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 TIMD4Q96H15 378 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 COQ2Q96H96 371 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 LURAP1Q96LR2 239 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 BPESC1Q9GZL8 116 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 NARFLQ9H6Q4 476 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 ZNF665Q9H7R5 613 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 SEBOXQ9HB31 216 aaPredicted RBP4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 SPACA1Q9HBV2 294 aa4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 MYOZ1Q9NP98 299 aaPredicted RBP4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 ZNF230Q9UIE0 474 aaPredicted RBP4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 SPTAN1Q13813 2472 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-218ENST00000495588 MYO18BQ8IUG5 2567 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 IGHV4-30-2A0A087WSY4 118 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 IGKV1D-8A0A087WSZ0 117 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 TRAV39A0A0B4J263 110 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 A0A1W2PQ09 198 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 MEX3AA1L020 520 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 CEACAM18A8MTB9 384 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 GABARAPH6UMI1 98 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 K7N7A8 449 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 CTDSPLO15194 276 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 SIGLEC5O15389 551 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 GSTZ1O43708 216 aaPredicted RBP4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 GLAP06280 429 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 CSF3P09919 207 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 DNASE1P24855 282 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 PRSS3P35030 304 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 GPR6P46095 362 aaPredicted RBP4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 RFX2P48378 723 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 P2RX3P56373 397 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 SEC61A1P61619 476 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 IFITM3Q01628 133 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 AESQ08117 197 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 RBM39Q14498 530 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 EDDM3AQ14507 147 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 ARL6IP1Q15041 203 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 GRK1Q15835 563 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 KCNJ8Q15842 424 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 PNLIPRP3Q17RR3 467 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 TMEM155Q4W5P6 130 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 RSBN1Q5VWQ0 802 aaPredicted RBP4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 SHEQ5VZ18 495 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 HIST2H2BDQ6DRA6 164 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 ZNF841Q6ZN19 808 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 PQLC2Q6ZP29 291 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 DNM1P46Q6ZS02 220 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 SLC36A1Q7Z2H8 476 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 TRAPPC6BQ86SZ2 158 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 HAPLN4Q86UW8 402 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 Q8N402 240 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 ZNF561Q8N587 486 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 GVQW1Q8N7I0 195 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 GDPD1Q8N9F7 314 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 MRPL30Q8TCC3 161 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 GPX8Q8TED1 209 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 C10orf105Q8TEF2 133 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 C15orf40Q8WUR7 153 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 SMIM4Q8WVI0 70 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 FCAMRQ8WWV6 532 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 RRNAD1Q96FB5 475 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 CMSS1Q9BQ75 279 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 DNTTIP1Q9H147 329 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 ABCB10Q9NRK6 738 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 RABL2AQ9UBK7 228 aaPredicted RBP4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 KAAG1Q9UBP8 84 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 KLK11Q9UBX7 282 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 KIF25Q9UIL4 384 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 RABL2BQ9UNT1 228 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 AKAP6Q13023 2319 aa4.51□□□□□ -1.69
GAPVD1-218ENST00000495588 NBPF19A0A087WUL8 3843 aa4.5□□□□□ -1.69
GAPVD1-218ENST00000495588 MEIKINA0A087WXM9 373 aa4.5□□□□□ -1.69
GAPVD1-218ENST00000495588 TMEM30CPA0ZSE6 113 aa4.5□□□□□ -1.69
GAPVD1-218ENST00000495588 NDUFS8O00217 210 aa4.5□□□□□ -1.69
GAPVD1-218ENST00000495588 SULT1C2O00338 296 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms