RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	NFYA	P23511	347 aa	Predicted RBP	11.09	□□□□□ -0.63
APTX-231	ENST00000494973	PPP1CC	P36873	323 aa	Known RBP	11.09	□□□□□ -0.63
APTX-231	ENST00000494973	UCP3	P55916	312 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	BPIFB3	P59826	476 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.09	□□□□□ -0.63
APTX-231	ENST00000494973	FAM71F2	Q6NXP2	309 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	C11orf88	Q6PI97	169 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	IDO2	Q6ZQW0	420 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	VMO1	Q7Z5L0	202 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	LHFPL1	Q86WI0	220 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	SLC38A6	Q8IZM9	456 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	ABHD12	Q8N2K0	398 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	C11orf42	Q8N5U0	333 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973		Q8N7P7	452 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	MINDY2	Q8NBR6	621 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.09	□□□□□ -0.63
APTX-231	ENST00000494973	ZBTB34	Q8NCN2	500 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	OR11H6	Q8NGC7	330 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	OR10V1	Q8NGI7	309 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	OR51S1	Q8NGJ8	323 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	OR56B4	Q8NH76	319 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	UBALD1	Q8TB05	177 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	ZFAND1	Q8TCF1	268 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	UPRT	Q96BW1	309 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	ZNF486	Q96H40	463 aa	Predicted RBP	11.09	□□□□□ -0.63
APTX-231	ENST00000494973	AKR1E2	Q96JD6	320 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	PCGF1	Q9BSM1	259 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	PIPOX	Q9P0Z9	390 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	ZNF221	Q9UK13	617 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	TBC1D24	Q9ULP9	559 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	MYO9A	B2RTY4	2548 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	WNK2	Q9Y3S1	2297 aa		11.09	□□□□□ -0.63
APTX-231	ENST00000494973	ITPR3	Q14573	2671 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	IGHV3-43	A0A0B4J1X8	118 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	RAB29	O14966	203 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	SMAD7	O15105	426 aa	Known RBP	11.08	□□□□□ -0.64
APTX-231	ENST00000494973	PLA2G10	O15496	165 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	CD5L	O43866	347 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	ZNF735	P0CB33	412 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	IGHV3-43D	P0DP04	118 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	MMP9	P14780	707 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	ZNF16	P17020	682 aa	Predicted RBP	11.08	□□□□□ -0.64
APTX-231	ENST00000494973	AADAC	P22760	399 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	SLC6A1	P30531	599 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	CEACAM3	P40198	252 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	IFITM3	Q01628	133 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	GPR157	Q5UAW9	335 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	SLC25A48	Q6ZT89	311 aa	Known RBP	11.08	□□□□□ -0.64
APTX-231	ENST00000494973	CMTM1	Q8IZ96	169 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	ZDHHC22	Q8N966	263 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	OR4D10	Q8NGI6	311 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	OR10X1	Q8NGY0	326 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	SLC6A7	Q99884	636 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	C11orf54	Q9H0W9	315 aa	Predicted RBP	11.08	□□□□□ -0.64
APTX-231	ENST00000494973	SIRT7	Q9NRC8	400 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	GAB2	Q9UQC2	676 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973	C14orf166	Q9Y224	244 aa	Known RBP	11.08	□□□□□ -0.64
APTX-231	ENST00000494973	MED13L	Q71F56	2210 aa		11.08	□□□□□ -0.64
APTX-231	ENST00000494973		J3QR06	171 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	TXNL1	O43396	289 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	NDUFB6	O95139	128 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	PGAM2	P15259	253 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	GPR12	P47775	334 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	GNG10	P50151	68 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	UBE2E1	P51965	193 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	ARHGDIB	P52566	201 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	LGALS4	P56470	323 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	TAS2R31	P59538	309 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	FXYD4	P59646	89 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	GNMT	Q14749	295 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	MIDN	Q504T8	468 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	MINOS1	Q5TGZ0	78 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	ZNF626	Q68DY1	528 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	FAAP20	Q6NZ36	180 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.07	□□□□□ -0.64
APTX-231	ENST00000494973	ZNF645	Q8N7E2	425 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	CCDC71L	Q8N9Z2	235 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	MAPK1IP1L	Q8NDC0	245 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	ZNF439	Q8NDP4	499 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	FAHD2A	Q96GK7	314 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	TBX15	Q96SF7	602 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	S1PR3	Q99500	378 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	SLC5A7	Q9GZV3	580 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	MMP28	Q9H239	520 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	PSG11	Q9UQ72	335 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	TBL2	Q9Y4P3	447 aa	Known RBP	11.07	□□□□□ -0.64
APTX-231	ENST00000494973	MINOS1-NBL1	R4GNA1	71 aa		11.07	□□□□□ -0.64
APTX-231	ENST00000494973	PIGBOS1	A0A0B4J2F0	54 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	RNF212B	A8MTL3	300 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	OOSP1	A8MZH6	123 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	MMP23A	O75900	390 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	OR8U9	P0C7N5	309 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	HOXB4	P17483	251 aa	Predicted RBP	11.06	□□□□□ -0.64
APTX-231	ENST00000494973	HNF1A	P20823	631 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	COX7A1	P24310	79 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	HTR1D	P28221	377 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	ZNF137P	P52743	207 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	SCGB2A2	Q13296	93 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	HLA-DRB5	Q30154	266 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	ABCA11P	Q4W5N1	156 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms