RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 KIR2DL5BA0A0G2JPC4 375 aa13.03□□□□□ -0.32
SDF4-207ENST00000494748 TMEM250H0YL14 139 aa13.03□□□□□ -0.32
SDF4-207ENST00000494748 GPM6AP51674 278 aa13.03□□□□□ -0.32
SDF4-207ENST00000494748 LBX1P52954 281 aa13.03□□□□□ -0.32
SDF4-207ENST00000494748 RAC3P60763 192 aa13.03□□□□□ -0.32
SDF4-207ENST00000494748 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.03□□□□□ -0.32
SDF4-207ENST00000494748 MYPOPQ86VE0 399 aaPredicted RBP13.03□□□□□ -0.32
SDF4-207ENST00000494748 KIR2DL5AQ8N109 375 aa13.03□□□□□ -0.32
SDF4-207ENST00000494748 OR56B2PQ8NGI1 322 aa13.03□□□□□ -0.32
SDF4-207ENST00000494748 PINX1Q96BK5 328 aaKnown RBP13.03□□□□□ -0.32
SDF4-207ENST00000494748 FREM1Q5H8C1 2179 aa13.03□□□□□ -0.32
SDF4-207ENST00000494748 LOC102723996A0A087X1L8 192 aa13.02□□□□□ -0.32
SDF4-207ENST00000494748 H7BYZ3 331 aa13.02□□□□□ -0.32
SDF4-207ENST00000494748 RPL15P61313 204 aaKnown RBP13.02□□□□□ -0.32
SDF4-207ENST00000494748 PRDX4Q13162 271 aa13.02□□□□□ -0.32
SDF4-207ENST00000494748 TMEM37Q8WXS4 190 aa13.02□□□□□ -0.32
SDF4-207ENST00000494748 LHX4Q969G2 390 aa13.02□□□□□ -0.32
SDF4-207ENST00000494748 OR1A1Q9P1Q5 309 aa13.02□□□□□ -0.32
SDF4-207ENST00000494748 POLR3KQ9Y2Y1 108 aaPredicted RBP13.02□□□□□ -0.32
SDF4-207ENST00000494748 GTF3C1Q12789 2109 aa13.02□□□□□ -0.32
SDF4-207ENST00000494748 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.02□□□□□ -0.32
SDF4-207ENST00000494748 IFNA1P01562 189 aa13.02□□□□□ -0.32
SDF4-207ENST00000494748 NPPCP23582 126 aa13.02□□□□□ -0.32
SDF4-207ENST00000494748 TRAV24A0A0B4J272 114 aa13.02□□□□□ -0.33
SDF4-207ENST00000494748 TESK1Q15569 626 aa13.02□□□□□ -0.33
SDF4-207ENST00000494748 CLDN23Q96B33 292 aa13.02□□□□□ -0.33
SDF4-207ENST00000494748 WFIKKN1Q96NZ8 548 aa13.02□□□□□ -0.33
SDF4-207ENST00000494748 GPR35Q9HC97 309 aa13.02□□□□□ -0.33
SDF4-207ENST00000494748 ERRFI1Q9UJM3 462 aaPredicted RBP13.02□□□□□ -0.33
SDF4-207ENST00000494748 TIMM9Q9Y5J7 89 aa13.02□□□□□ -0.33
SDF4-207ENST00000494748 A0A0G2JMM0 328 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 UBE2L5PA0A1B0GUS4 154 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 A0A1W2PPB8 328 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 A0A1W2PPQ1 181 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 A0A1W2PQM1 296 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 A0A1W2PRS3 328 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 KIR3DP1A8MWS1 328 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 SYNGR1O43759 233 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 SERPINE2P07093 398 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 TMEM14EPQ6UXP3 125 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 IMMP1LQ96LU5 166 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 PLA2G3Q9NZ20 509 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 C19orf25Q9UFG5 118 aaPredicted RBP13.01□□□□□ -0.33
SDF4-207ENST00000494748 IGHV1-45A0A0A0MS14 117 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 HMGB3O15347 200 aaKnown RBP13.01□□□□□ -0.33
SDF4-207ENST00000494748 DNPH1O43598 174 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 RAB4AP20338 218 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 CBLN4Q9NTU7 201 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 DIDO1Q9BTC0 2240 aaKnown RBP13.01□□□□□ -0.33
SDF4-207ENST00000494748 TMEM210A6NLX4 147 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 GDF9O60383 454 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 TDGF1P3P51864 188 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 ZDHHC23Q8IYP9 409 aa13.01□□□□□ -0.33
SDF4-207ENST00000494748 LY6G6EA0A0G2JKS1 128 aa13□□□□□ -0.33
SDF4-207ENST00000494748 NUPR1O60356 82 aa13□□□□□ -0.33
SDF4-207ENST00000494748 GYPAP02724 150 aa13□□□□□ -0.33
SDF4-207ENST00000494748 HBG1P69891 147 aa13□□□□□ -0.33
SDF4-207ENST00000494748 HBG2P69892 147 aa13□□□□□ -0.33
SDF4-207ENST00000494748 CEACAM21Q3KPI0 293 aa13□□□□□ -0.33
SDF4-207ENST00000494748 C1orf194Q5T5A4 169 aa13□□□□□ -0.33
SDF4-207ENST00000494748 AAED1Q7RTV5 226 aa13□□□□□ -0.33
SDF4-207ENST00000494748 TMEM18Q96B42 140 aa13□□□□□ -0.33
SDF4-207ENST00000494748 U3KQA8 63 aa13□□□□□ -0.33
SDF4-207ENST00000494748 IGHV5-10-1A0A0J9YXX1 117 aa13□□□□□ -0.33
SDF4-207ENST00000494748 A0A1B0GUS0 222 aa13□□□□□ -0.33
SDF4-207ENST00000494748 NPIPB11E5RHQ5 1161 aa13□□□□□ -0.33
SDF4-207ENST00000494748 MLNRO43193 412 aa13□□□□□ -0.33
SDF4-207ENST00000494748 SS18L1O75177 396 aaPredicted RBP13□□□□□ -0.33
SDF4-207ENST00000494748 UMODP07911 640 aa13□□□□□ -0.33
SDF4-207ENST00000494748 ERVFC1-1P60608 527 aa13□□□□□ -0.33
SDF4-207ENST00000494748 RIPPLY2Q5TAB7 128 aa13□□□□□ -0.33
SDF4-207ENST00000494748 TMEM144Q7Z5S9 345 aa13□□□□□ -0.33
SDF4-207ENST00000494748 CISD2Q8N5K1 135 aaKnown RBP13□□□□□ -0.33
SDF4-207ENST00000494748 OR10V1Q8NGI7 309 aa13□□□□□ -0.33
SDF4-207ENST00000494748 OR2T10Q8NGZ9 312 aa13□□□□□ -0.33
SDF4-207ENST00000494748 ZNF488Q96MN9 340 aa13□□□□□ -0.33
SDF4-207ENST00000494748 OR51I2Q9H344 312 aa13□□□□□ -0.33
SDF4-207ENST00000494748 SLC25A22Q9H936 323 aa13□□□□□ -0.33
SDF4-207ENST00000494748 SLC39A9Q9NUM3 307 aa13□□□□□ -0.33
SDF4-207ENST00000494748 RARRES3Q9UL19 164 aa13□□□□□ -0.33
SDF4-207ENST00000494748 CCKARP32238 428 aa13□□□□□ -0.33
SDF4-207ENST00000494748 SRP14P37108 136 aaKnown RBP13□□□□□ -0.33
SDF4-207ENST00000494748 ANAPC16Q96DE5 110 aa13□□□□□ -0.33
SDF4-207ENST00000494748 PMS2P5A8MQ11 134 aa12.99□□□□□ -0.33
SDF4-207ENST00000494748 LILRA1O75019 489 aa12.99□□□□□ -0.33
SDF4-207ENST00000494748 COX6A1P12074 109 aa12.99□□□□□ -0.33
SDF4-207ENST00000494748 SLC38A11Q08AI6 406 aa12.99□□□□□ -0.33
SDF4-207ENST00000494748 IQCJQ1A5X6 159 aa12.99□□□□□ -0.33
SDF4-207ENST00000494748 SPANXN5Q5MJ07 72 aa12.99□□□□□ -0.33
SDF4-207ENST00000494748 OR10J5Q8NHC4 309 aa12.99□□□□□ -0.33
SDF4-207ENST00000494748 OR5B12Q96R08 314 aa12.99□□□□□ -0.33
SDF4-207ENST00000494748 ACOT6Q3I5F7 207 aaPredicted RBP12.99□□□□□ -0.33
SDF4-207ENST00000494748 CD300LBA8K4G0 201 aa12.99□□□□□ -0.33
SDF4-207ENST00000494748 IL3RAP26951 378 aa12.99□□□□□ -0.33
SDF4-207ENST00000494748 PCBD1P61457 104 aa12.99□□□□□ -0.33
SDF4-207ENST00000494748 GUSBP11Q6P575 273 aa12.99□□□□□ -0.33
SDF4-207ENST00000494748 PCED1AQ9H1Q7 454 aa12.99□□□□□ -0.33
SDF4-207ENST00000494748 ZNF552Q9H707 407 aaPredicted RBP12.99□□□□□ -0.33
SDF4-207ENST00000494748 MED12LQ86YW9 2145 aa12.98□□□□□ -0.33
SDF4-207ENST00000494748 ZNF503-AS2A6NEH8 195 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms