RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 CENPVQ7Z7K6 275 aaPredicted RBP6.43□□□□□ -1.38
RIF1-211ENST00000494333 LINC00596Q86U02 117 aa6.43□□□□□ -1.38
RIF1-211ENST00000494333 OR5AU1Q8NGC0 362 aa6.43□□□□□ -1.38
RIF1-211ENST00000494333 OR10A7Q8NGE5 316 aa6.43□□□□□ -1.38
RIF1-211ENST00000494333 CCDC107Q8WV48 283 aa6.43□□□□□ -1.38
RIF1-211ENST00000494333 TOMM40LQ969M1 308 aa6.43□□□□□ -1.38
RIF1-211ENST00000494333 ARL11Q969Q4 196 aa6.43□□□□□ -1.38
RIF1-211ENST00000494333 RPEQ96AT9 228 aa6.43□□□□□ -1.38
RIF1-211ENST00000494333 RBM14Q96PK6 669 aaKnown RBP6.43□□□□□ -1.38
RIF1-211ENST00000494333 CITED2Q99967 270 aaPredicted RBP6.43□□□□□ -1.38
RIF1-211ENST00000494333 SLC25A33Q9BSK2 321 aa6.43□□□□□ -1.38
RIF1-211ENST00000494333 WDR12Q9GZL7 423 aaKnown RBP6.43□□□□□ -1.38
RIF1-211ENST00000494333 DCLRE1BQ9H816 532 aa6.43□□□□□ -1.38
RIF1-211ENST00000494333 LINC00574Q9H8X3 128 aa6.43□□□□□ -1.38
RIF1-211ENST00000494333 MRPS28Q9Y2Q9 187 aaKnown RBP6.43□□□□□ -1.38
RIF1-211ENST00000494333 AMMECR1Q9Y4X0 333 aaPredicted RBP6.43□□□□□ -1.38
RIF1-211ENST00000494333 WNK1Q9H4A3 2382 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 TMEM30CPA0ZSE6 113 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 SH2D7A6NKC9 451 aaPredicted RBP6.42□□□□□ -1.38
RIF1-211ENST00000494333 MCRIP1C9JLW8 97 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 PIN1P1O15428 100 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 OR2F2O95006 317 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 MT-ND4P03905 459 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 MADCAM1Q13477 382 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 DIAPH2-AS1Q14236 149 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 HES1Q14469 280 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 HNF4GQ14541 408 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 C9orf152Q5JTZ5 239 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 C6orf141Q5SZD1 244 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 AWAT2Q6E213 333 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 SLC16A12Q6ZSM3 486 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 NDUFA11Q86Y39 141 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 CDH26Q8IXH8 852 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 DRAM1Q8N682 238 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 OR10X1Q8NGY0 326 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 UBALD1Q8TB05 177 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 WIPF2Q8TF74 440 aaPredicted RBP6.42□□□□□ -1.38
RIF1-211ENST00000494333 DPF1Q92782 380 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 MRPS24Q96EL2 167 aaKnown RBP6.42□□□□□ -1.38
RIF1-211ENST00000494333 DERL3Q96Q80 235 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 BANF2Q9H503 90 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 FKBP14Q9NWM8 211 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 PEX16Q9Y5Y5 336 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 TRRAPQ9Y4A5 3859 aa6.42□□□□□ -1.38
RIF1-211ENST00000494333 IGHV3-43A0A0B4J1X8 118 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 FAM90A18PA6NE21 464 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 FAM90A16PA6NEW6 464 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 FAM90A20PA6NIJ5 464 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 LINC01548A6NM66 108 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 FAM90A9PA6NNJ1 464 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 FAM90A12PA8MX19 464 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 FAM90A5PA8MXJ8 464 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 G3V4G9 280 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 C15orf65H3BRN8 121 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 AIPO00170 330 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 SDCBPO00560 298 aaPredicted RBP6.41□□□□□ -1.38
RIF1-211ENST00000494333 ORC5O43913 435 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 CRTAPO75718 401 aaPredicted RBP6.41□□□□□ -1.38
RIF1-211ENST00000494333 CDK1P06493 297 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 SNRNP70P08621 437 aaKnown RBP6.41□□□□□ -1.38
RIF1-211ENST00000494333 FAM90A15PP0C7V4 464 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 FAM90A13PP0C7W8 464 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 FAM90A14PP0C7W9 464 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 FAM90A24PP0C7X0 464 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 IGHV3-43DP0DP04 118 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 MGMTP16455 207 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 MAPK3P27361 379 aaPredicted RBP6.41□□□□□ -1.38
RIF1-211ENST00000494333 VHLP40337 213 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 RAB7AP51149 207 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 CFHR3Q02985 330 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 GABPB1Q06547 395 aaPredicted RBP6.41□□□□□ -1.38
RIF1-211ENST00000494333 INSL4Q14641 139 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 SPHARQ15513 63 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 ACSM3Q53FZ2 586 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 SYT6Q5T7P8 510 aaPredicted RBP6.41□□□□□ -1.38
RIF1-211ENST00000494333 FAM90A2PQ658T7 463 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 RAB12Q6IQ22 244 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 ZNF497Q6ZNH5 498 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 MS4A15Q8N5U1 240 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 TMEM104Q8NE00 496 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 OR4F17Q8NGA8 305 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 OR52M1Q8NGK5 317 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 OR4K15Q8NH41 348 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 OR56B4Q8NH76 319 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 THRSPQ92748 146 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 MYDGFQ969H8 173 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 RITA1Q96K30 269 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 OR4F4Q96R69 305 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 MND1Q9BWT6 205 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 SELENOIQ9C0D9 397 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 SPACA1Q9HBV2 294 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 SCN3BQ9NY72 215 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 TRAPPC2LQ9UL33 140 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 KIAA2026Q5HYC2 2103 aa6.41□□□□□ -1.38
RIF1-211ENST00000494333 DSCAML1Q8TD84 2053 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 A0A1W2PPI3 338 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 TCRBV4S1A1TA0A5B7 111 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 H0YHG0 523 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 M0QZK8 103 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 CCRL2O00421 344 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms