RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 WNT2BQ93097 391 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 TRAV39A0A0B4J263 110 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 BMPR1BO00238 502 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 COX6B1P14854 86 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 RPL29P47914 159 aaKnown RBP16.6■□□□□ 0.25
COL27A1-207ENST00000494090 STARD6P59095 220 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FAM209AQ5JX71 171 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 SNRNP40Q96DI7 357 aaKnown RBP16.6■□□□□ 0.25
COL27A1-207ENST00000494090 OR51B2Q9Y5P1 312 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 KNTC1P50748 2209 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 M0R143 59 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 PTBP3O95758 552 aaKnown RBP16.6■□□□□ 0.25
COL27A1-207ENST00000494090 HLA-DRB5Q30154 266 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 OR4C5Q8NGB2 326 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 NRIP2Q9BQI9 281 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 TDRD15B5MCY1 1934 aaKnown RBP16.6■□□□□ 0.25
COL27A1-207ENST00000494090 CORTO00230 105 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FAM157CP0CG43 387 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 ELOBQ15370 118 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 ZNF660Q6AZW8 331 aaPredicted RBP16.6■□□□□ 0.25
COL27A1-207ENST00000494090 PET117Q6UWS5 81 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 ADIPOR1Q96A54 375 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 CTHRC1Q96CG8 243 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 OR5AC2Q9NZP5 309 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 MYO16Q9Y6X6 1858 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 HELTA6NFD8 242 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 PIN1P1O15428 100 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 SMPD2O60906 423 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 FGF12P61328 243 aa16.6■□□□□ 0.25
COL27A1-207ENST00000494090 MRPL30Q8TCC3 161 aaKnown RBP16.6■□□□□ 0.25
COL27A1-207ENST00000494090 COL11A1P12107 1806 aaPredicted RBP16.59■□□□□ 0.25
COL27A1-207ENST00000494090 ZNF253O75346 499 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 SERF2P84101 59 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 CEBPEQ15744 281 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 SNX22Q96L94 193 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 TMEM204Q9BSN7 226 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 FAM181AQ8N9Y4 354 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 ZNF552Q9H707 407 aaPredicted RBP16.59■□□□□ 0.25
COL27A1-207ENST00000494090 RABAC1Q9UI14 185 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 ZDHHC8Q9ULC8 765 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 IGHV3OR15-7A0A075B7D8 119 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 ZNF658BQ4V348 819 aaPredicted RBP16.59■□□□□ 0.25
COL27A1-207ENST00000494090 HIGD1AQ9Y241 93 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 M0R2Z0 102 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 CLDN14O95500 239 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 SLC35B1P78383 322 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 ECSCRQ19T08 205 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 SLC25A33Q9BSK2 321 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 SRD5A3Q9H8P0 318 aa16.59■□□□□ 0.25
COL27A1-207ENST00000494090 NPDC1Q9NQX5 325 aaPredicted RBP16.59■□□□□ 0.25
COL27A1-207ENST00000494090 COLQQ9Y215 455 aaPredicted RBP16.59■□□□□ 0.25
COL27A1-207ENST00000494090 SCN3AQ9NY46 2000 aa16.58■□□□□ 0.25
COL27A1-207ENST00000494090 ISLRO14498 428 aa16.58■□□□□ 0.24
COL27A1-207ENST00000494090 KIR2DL2P43627 348 aaPredicted RBP16.58■□□□□ 0.24
COL27A1-207ENST00000494090 DHRS11Q6UWP2 260 aa16.58■□□□□ 0.24
COL27A1-207ENST00000494090 PCGF1Q9BSM1 259 aa16.58■□□□□ 0.24
COL27A1-207ENST00000494090 H0Y980 276 aa16.58■□□□□ 0.24
COL27A1-207ENST00000494090 LRP11Q86VZ4 500 aa16.58■□□□□ 0.24
COL27A1-207ENST00000494090 OR1K1Q8NGR3 316 aa16.58■□□□□ 0.24
COL27A1-207ENST00000494090 SRSF10O75494 262 aaKnown RBP16.58■□□□□ 0.24
COL27A1-207ENST00000494090 MELTFP08582 738 aa16.58■□□□□ 0.24
COL27A1-207ENST00000494090 RPL27AP46776 148 aaKnown RBP16.58■□□□□ 0.24
COL27A1-207ENST00000494090 HIST3H3Q16695 136 aa16.58■□□□□ 0.24
COL27A1-207ENST00000494090 TMEM255AQ5JRV8 349 aa16.58■□□□□ 0.24
COL27A1-207ENST00000494090 POLR2AP24928 1970 aaKnown RBP16.57■□□□□ 0.24
COL27A1-207ENST00000494090 KCNAB3O43448 404 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 MUC1P15941 1255 aaPredicted RBP16.57■□□□□ 0.24
COL27A1-207ENST00000494090 FOXL2P58012 376 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 FAM222BQ8WU58 562 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 STARD4Q96DR4 205 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 PITPNC1Q9UKF7 332 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 NRXN2Q9P2S2 1712 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 FAM106CPP0CH98 169 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 CTSSP25774 331 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 HOXA6P31267 233 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 ZNF880Q6PDB4 577 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 Q6ZN92 141 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 FUT9Q9Y231 359 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 RBBP6Q7Z6E9 1792 aaKnown RBP16.57■□□□□ 0.24
COL27A1-207ENST00000494090 A0A1W2PP11 408 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 SCARF2Q96GP6 870 aaPredicted RBP16.57■□□□□ 0.24
COL27A1-207ENST00000494090 TMEM222Q9H0R3 208 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 HYPMO75409 117 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 GCSHP23434 173 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 PPP1CCP36873 323 aaKnown RBP16.57■□□□□ 0.24
COL27A1-207ENST00000494090 TCL1AP56279 114 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 LRRC75BQ2VPJ9 315 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 ZNF488Q96MN9 340 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 FAM206AQ9NX38 181 aa16.57■□□□□ 0.24
COL27A1-207ENST00000494090 CD81P60033 236 aa16.56■□□□□ 0.24
COL27A1-207ENST00000494090 SELENOTP62341 195 aa16.56■□□□□ 0.24
COL27A1-207ENST00000494090 MAP1LC3CQ9BXW4 147 aa16.56■□□□□ 0.24
COL27A1-207ENST00000494090 IL19Q9UHD0 177 aa16.56■□□□□ 0.24
COL27A1-207ENST00000494090 MPDU1O75352 247 aa16.56■□□□□ 0.24
COL27A1-207ENST00000494090 BCL2P10415 239 aa16.56■□□□□ 0.24
COL27A1-207ENST00000494090 FCARP24071 287 aa16.56■□□□□ 0.24
COL27A1-207ENST00000494090 VWA1Q6PCB0 445 aa16.56■□□□□ 0.24
COL27A1-207ENST00000494090 ABHD14BQ96IU4 210 aa16.56■□□□□ 0.24
COL27A1-207ENST00000494090 DCAF16Q9NXF7 216 aa16.56■□□□□ 0.24
COL27A1-207ENST00000494090 IGSF11Q5DX21 431 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms