RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ARF6P62330 175 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 BAMBIQ13145 260 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 Q3ZCU0 254 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 BTNL3Q6UXE8 466 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 C1orf122Q6ZSJ8 110 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 LDLRAD3Q86YD5 345 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 Q8N7P7 452 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 ZNF439Q8NDP4 499 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 LEAP2Q969E1 77 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 SCGB3A2Q96PL1 93 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 MARVELD1Q9BSK0 173 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 SUCNR1Q9BXA5 334 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 SLC5A7Q9GZV3 580 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 TMEM133Q9H2Q1 129 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 METTL8Q9H825 291 aaKnown RBP9.34□□□□□ -0.91
MCF2L-231ENST00000494043 GPR132Q9UNW8 380 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 FLVCR2Q9UPI3 526 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 VSIG4Q9Y279 399 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 INSIG2Q9Y5U4 225 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 KPTNQ9Y664 436 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 AKAP9Q99996 3911 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 VPS13CQ709C8 3753 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 DOCK11Q5JSL3 2073 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 PRRC2AP48634 2157 aaKnown RBP9.33□□□□□ -0.92
MCF2L-231ENST00000494043 B4DSR2 109 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 SLC31A2O15432 143 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 IGHV3-7P01780 117 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 RLN1P04808 185 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 OR8U9P0C7N5 309 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 CD34P28906 385 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 GNG10P50151 68 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 DVL1P1P54792 670 aaPredicted RBP9.33□□□□□ -0.92
MCF2L-231ENST00000494043 SLC38A6Q8IZM9 456 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 C8orf31Q8N9H6 132 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 OR2AK2Q8NG84 335 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 OR8U1Q8NH10 309 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 ZFAND1Q8TCF1 268 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 SECTM1Q8WVN6 248 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 ABHD14AQ9BUJ0 271 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 RSRP1Q9BUV0 290 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 SIRPDQ9H106 197 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 PSG11Q9UQ72 335 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 RBM7Q9Y580 266 aaKnown RBP9.33□□□□□ -0.92
MCF2L-231ENST00000494043 CREBBPQ92793 2442 aa9.33□□□□□ -0.92
MCF2L-231ENST00000494043 ITPR3Q14573 2671 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 TRAV20A0A0B4J274 112 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 INMT-MINDY4F8WBC2 141 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 ST8SIA5O15466 376 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 PEX14O75381 377 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 CTSDP07339 412 aaPredicted RBP9.32□□□□□ -0.92
MCF2L-231ENST00000494043 PI3P19957 117 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 PRTN3P24158 256 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 RAB7AP51149 207 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 MECP2P51608 486 aaKnown RBP9.32□□□□□ -0.92
MCF2L-231ENST00000494043 ZNF134P52741 427 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 RAG2P55895 527 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 CT45A1Q5HYN5 189 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 METTL11BQ5VVY1 283 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 LPCAT3Q6P1A2 487 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 Q6ZNX1 250 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 SLC25A48Q6ZT89 311 aaKnown RBP9.32□□□□□ -0.92
MCF2L-231ENST00000494043 TMED4Q7Z7H5 227 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 LINC01356Q8N9X3 169 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 MAPK1IP1LQ8NDC0 245 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 CT45A3Q8NHU0 189 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 ZNF486Q96H40 463 aaPredicted RBP9.32□□□□□ -0.92
MCF2L-231ENST00000494043 AGMATQ9BSE5 352 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 RTBDNQ9BSG5 229 aaPredicted RBP9.32□□□□□ -0.92
MCF2L-231ENST00000494043 OR2D2Q9H210 308 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 IFI27L2Q9H2X8 130 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 C5orf66Q9H5L9 145 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 UNKLQ9H9P5 680 aaKnown RBP9.32□□□□□ -0.92
MCF2L-231ENST00000494043 SIRT7Q9NRC8 400 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 CCL28Q9NRJ3 127 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 KCNS2Q9ULS6 477 aa9.32□□□□□ -0.92
MCF2L-231ENST00000494043 C14orf166Q9Y224 244 aaKnown RBP9.32□□□□□ -0.92
MCF2L-231ENST00000494043 IGHV2-26A0A0B4J1V2 119 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 A0A1W2PPE3 182 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 GPR31O00270 319 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 HSD17B6O14756 317 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 SLC22A5O76082 557 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 IGHV4-31P0DP07 118 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 MMP9P14780 707 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 ANXA7P20073 488 aaKnown RBP9.31□□□□□ -0.92
MCF2L-231ENST00000494043 COX7A1P24310 79 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 GNRHRP30968 328 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 DLX1P56177 255 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 RAB25P57735 213 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 TAS2R31P59538 309 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 PAX8Q06710 450 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 MSMO1Q15800 293 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 TMEM249Q2WGJ8 235 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 ABCA11PQ4W5N1 156 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 DCAF12L2Q5VW00 463 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 ZNF818PQ6ZRF7 136 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 VMO1Q7Z5L0 202 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 SLC25A42Q86VD7 318 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 ABHD12Q8N2K0 398 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 LINC00311Q8N616 119 aa9.31□□□□□ -0.92
MCF2L-231ENST00000494043 ZNF645Q8N7E2 425 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms