RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 IGHV1-69DA0A0B4J2H0 117 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 ANKRD20A5PA0PJZ0 165 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 NAP1L6A6NFF2 107 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 J3QR06 171 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 LY6G6DO95868 133 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 IGHV1-69P01742 117 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 PMP2P02689 132 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 EPHA1P21709 976 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 HTR1DP28221 377 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 PPP1CCP36873 323 aaKnown RBP12.19□□□□□ -0.46
ACTB-213ENST00000493945 LUMP51884 338 aaPredicted RBP12.19□□□□□ -0.46
ACTB-213ENST00000493945 LOXL3P58215 753 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 DEFA1P59665 94 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 DEFA3P59666 94 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 LSAMPQ13449 338 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 DYRK1AQ13627 763 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 MORN2Q502X0 79 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 IGSF11Q5DX21 431 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 FAM120AOSQ5T036 256 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 ZNF626Q68DY1 528 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 LPCAT3Q6P1A2 487 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 C11orf42Q8N5U0 333 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 OR52L2PQ8NGH6 319 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 UBALD1Q8TB05 177 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 S1PR3Q99500 378 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 BEX2Q9BXY8 128 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 RDH8Q9NYR8 311 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 OR2W1Q9Y3N9 320 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 LEUTXA8MZ59 168 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 OOSP1A8MZH6 123 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 RNASEK-C17orf49H0YIS7 233 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 NPFFO15130 113 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 CD74P04233 296 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 AMY2AP04746 511 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 FCER2P06734 321 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 FCGR2CP31995 323 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 KRTAP1-1Q07627 177 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 HLA-DRB5Q30154 266 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 FAM71F2Q6NXP2 309 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 Q6ZPA2 131 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 OVCH2Q7RTZ1 564 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 H1FOOQ8IZA3 346 aaPredicted RBP12.18□□□□□ -0.46
ACTB-213ENST00000493945 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.18□□□□□ -0.46
ACTB-213ENST00000493945 TRIM63Q969Q1 353 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 RPEQ96AT9 228 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 SCGB3A2Q96PL1 93 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 MCUBQ9NWR8 336 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 PSG11Q9UQ72 335 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 ACANP16112 2415 aa12.18□□□□□ -0.46
ACTB-213ENST00000493945 CENPVL3A0A0U1RRI6 287 aa12.17□□□□□ -0.46
ACTB-213ENST00000493945 RAB29O14966 203 aa12.17□□□□□ -0.46
ACTB-213ENST00000493945 MMP23AO75900 390 aa12.17□□□□□ -0.46
ACTB-213ENST00000493945 CD3DP04234 171 aa12.17□□□□□ -0.46
ACTB-213ENST00000493945 FBP1P09467 338 aa12.17□□□□□ -0.46
ACTB-213ENST00000493945 IL7P13232 177 aa12.17□□□□□ -0.46
ACTB-213ENST00000493945 GPR12P47775 334 aa12.17□□□□□ -0.46
ACTB-213ENST00000493945 HERPUD1Q15011 391 aa12.17□□□□□ -0.46
ACTB-213ENST00000493945 C16orf87Q6PH81 154 aa12.17□□□□□ -0.46
ACTB-213ENST00000493945 SLC25A48Q6ZT89 311 aaKnown RBP12.17□□□□□ -0.46
ACTB-213ENST00000493945 GIMAP1Q8WWP7 306 aa12.17□□□□□ -0.46
ACTB-213ENST00000493945 OR1A1Q9P1Q5 309 aa12.17□□□□□ -0.46
ACTB-213ENST00000493945 DPM3Q9P2X0 92 aa12.17□□□□□ -0.46
ACTB-213ENST00000493945 TLN2Q9Y4G6 2542 aa12.17□□□□□ -0.46
ACTB-213ENST00000493945 F8P00451 2351 aa12.16□□□□□ -0.46
ACTB-213ENST00000493945 IGKV1D-8A0A087WSZ0 117 aa12.16□□□□□ -0.46
ACTB-213ENST00000493945 ODF3BA8MYP8 253 aa12.16□□□□□ -0.46
ACTB-213ENST00000493945 PPYP01298 95 aa12.16□□□□□ -0.46
ACTB-213ENST00000493945 SRD5A1P18405 259 aa12.16□□□□□ -0.46
ACTB-213ENST00000493945 RFX2P48378 723 aa12.16□□□□□ -0.46
ACTB-213ENST00000493945 CBX3Q13185 183 aa12.16□□□□□ -0.46
ACTB-213ENST00000493945 KLRD1Q13241 179 aa12.16□□□□□ -0.46
ACTB-213ENST00000493945 GNMTQ14749 295 aa12.16□□□□□ -0.46
ACTB-213ENST00000493945 MZT2BQ6NZ67 158 aa12.16□□□□□ -0.46
ACTB-213ENST00000493945 RBMS3Q6XE24 437 aaKnown RBP12.16□□□□□ -0.46
ACTB-213ENST00000493945 PDZD9Q8IXQ8 264 aa12.16□□□□□ -0.46
ACTB-213ENST00000493945 CMTM1Q8IZ96 169 aa12.16□□□□□ -0.46
ACTB-213ENST00000493945 LYG1Q8N1E2 194 aa12.16□□□□□ -0.46
ACTB-213ENST00000493945 TOMM40LQ969M1 308 aa12.16□□□□□ -0.46
ACTB-213ENST00000493945 MALSU1Q96EH3 234 aa12.16□□□□□ -0.46
ACTB-213ENST00000493945 ZNF2Q9BSG1 426 aaPredicted RBP12.16□□□□□ -0.46
ACTB-213ENST00000493945 NAV3Q8IVL0 2385 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 IGKV1-6A0A0C4DH72 117 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 BTBD17A6NE02 478 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 CYSRT1A8MQ03 144 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 BUB1B-PAK6H3BSN5 160 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 M0QYG6 137 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 UPK1BO75841 260 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 IGLV1-47P01700 117 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 NFYAP23511 347 aaPredicted RBP12.15□□□□□ -0.46
ACTB-213ENST00000493945 SAA4P35542 130 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 MSMO1Q15800 293 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 SCGB2B2Q4G0G5 96 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 C11orf88Q6PI97 169 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 DHRS11Q6UWP2 260 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 C9orf139Q6ZV77 190 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 LYSMD2Q8IV50 215 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 ZBTB34Q8NCN2 500 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 OR4C16Q8NGL9 310 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 CYYR1Q96J86 154 aa12.15□□□□□ -0.46
ACTB-213ENST00000493945 OR2D2Q9H210 308 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms