RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 CD3DP04234 171 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 IL3RAP26951 378 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 HRH1P35367 487 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 CEACAM6P40199 344 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 TSPAN5P62079 268 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 SCGB2A2Q13296 93 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 HERPUD1Q15011 391 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 MORN2Q502X0 79 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 IGSF11Q5DX21 431 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 GPR157Q5UAW9 335 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 ZNF57Q68EA5 555 aaPredicted RBP10.16□□□□□ -0.78
SNX17-208ENST00000493711 DHRS11Q6UWP2 260 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 ZNF782Q6ZMW2 699 aaPredicted RBP10.16□□□□□ -0.78
SNX17-208ENST00000493711 H1FOOQ8IZA3 346 aaPredicted RBP10.16□□□□□ -0.78
SNX17-208ENST00000493711 LINC00311Q8N616 119 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 BEND2Q8NDZ0 799 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 OR2AK2Q8NG84 335 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 OR52L2PQ8NGH6 319 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 OR6F1Q8NGZ6 308 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 NANPQ8TBE9 248 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 BORCS5Q969J3 196 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 SDHCQ99643 169 aaPredicted RBP10.16□□□□□ -0.78
SNX17-208ENST00000493711 SIRT7Q9NRC8 400 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 RDH8Q9NYR8 311 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 MALRD1Q5VYJ5 2156 aa10.16□□□□□ -0.78
SNX17-208ENST00000493711 IGKV1-6A0A0C4DH72 117 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 LANCL1O43813 399 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 UPK1BO75841 260 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 MMP23AO75900 390 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 PMP2P02689 132 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 PPP1CCP36873 323 aaKnown RBP10.15□□□□□ -0.78
SNX17-208ENST00000493711 CEACAM3P40198 252 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 LGALS4P56470 323 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 KRTAP1-1Q07627 177 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 KLF9Q13886 244 aaPredicted RBP10.15□□□□□ -0.78
SNX17-208ENST00000493711 BAK1Q16611 211 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 LTC4SQ16873 150 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 MIDNQ504T8 468 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 PLA1AQ53H76 456 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 MINOS1Q5TGZ0 78 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 UBALD1Q8TB05 177 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 PRRT1Q99946 306 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 PALMDQ9NP74 551 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 YAE1D1Q9NRH1 226 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 SCP2D1Q9UJQ7 156 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 PSG11Q9UQ72 335 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 OR2W1Q9Y3N9 320 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 MINOS1-NBL1R4GNA1 71 aa10.15□□□□□ -0.78
SNX17-208ENST00000493711 IGHV3-43A0A0B4J1X8 118 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 FAM172BPA6NC97 362 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 J3QR06 171 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 TUSC2O75896 110 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 FCER2P06734 321 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 IGHV3-43DP0DP04 118 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 FCGR2CP31995 323 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 ECI1P42126 302 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 RFX2P48378 723 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 LUMP51884 338 aaPredicted RBP10.14□□□□□ -0.79
SNX17-208ENST00000493711 DEFA1P59665 94 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 DEFA3P59666 94 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 HERV-K104P61576 105 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 MSMO1Q15800 293 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 ZNF626Q68DY1 528 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 LPCAT3Q6P1A2 487 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 CLEC9AQ6UXN8 241 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 SLC25A48Q6ZT89 311 aaKnown RBP10.14□□□□□ -0.79
SNX17-208ENST00000493711 PNKDQ8N490 385 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.14□□□□□ -0.79
SNX17-208ENST00000493711 ZNF439Q8NDP4 499 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 OR10V1Q8NGI7 309 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 LHX4Q969G2 390 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 ABHD14AQ9BUJ0 271 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 MMP28Q9H239 520 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 ABCB10Q9NRK6 738 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 OR1A1Q9P1Q5 309 aa10.14□□□□□ -0.79
SNX17-208ENST00000493711 TBL2Q9Y4P3 447 aaKnown RBP10.14□□□□□ -0.79
SNX17-208ENST00000493711 RBM7Q9Y580 266 aaKnown RBP10.14□□□□□ -0.79
SNX17-208ENST00000493711 IGHV1-69DA0A0B4J2H0 117 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 ODF3BA8MYP8 253 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 OOSP1A8MZH6 123 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 RNASEK-C17orf49H0YIS7 233 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 J3QRK9 145 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 M0QYG6 137 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 LY6G6DO95868 133 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 IGLV1-47P01700 117 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 IGHV1-69P01742 117 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 AMY2AP04746 511 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 COX7A1P24310 79 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 GNMTQ14749 295 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 HLA-DRB5Q30154 266 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 MZT2BQ6NZ67 158 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 C16orf87Q6PH81 154 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 OR4C16Q8NGL9 310 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 OR10X1Q8NGY0 326 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 TERB2Q8NHR7 220 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 SCGB3A2Q96PL1 93 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 C11orf54Q9H0W9 315 aaPredicted RBP10.13□□□□□ -0.79
SNX17-208ENST00000493711 HRASLSQ9HDD0 168 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 SLC2A8Q9NY64 477 aa10.13□□□□□ -0.79
SNX17-208ENST00000493711 PIPOXQ9P0Z9 390 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms