RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 JPT1Q9UK76 154 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 ZNF780AO75290 641 aaPredicted RBP10.79□□□□□ -0.68
PRPF40A-211ENST00000493468 TPPPO94811 219 aa10.79□□□□□ -0.68
PRPF40A-211ENST00000493468 CDRT1O95170 752 aa10.79□□□□□ -0.68
PRPF40A-211ENST00000493468 CNIH1O95406 144 aa10.79□□□□□ -0.68
PRPF40A-211ENST00000493468 BRI3O95415 125 aa10.79□□□□□ -0.68
PRPF40A-211ENST00000493468 CSN3P07498 182 aa10.79□□□□□ -0.68
PRPF40A-211ENST00000493468 CALB2P22676 271 aa10.79□□□□□ -0.68
PRPF40A-211ENST00000493468 MECP2P51608 486 aaKnown RBP10.79□□□□□ -0.68
PRPF40A-211ENST00000493468 CD81P60033 236 aa10.79□□□□□ -0.68
PRPF40A-211ENST00000493468 ZNF554Q86TJ5 538 aa10.79□□□□□ -0.68
PRPF40A-211ENST00000493468 SPATA24Q86W54 205 aa10.79□□□□□ -0.68
PRPF40A-211ENST00000493468 TSEN15Q8WW01 171 aaKnown RBP10.79□□□□□ -0.68
PRPF40A-211ENST00000493468 C4orf36Q96KX1 117 aa10.79□□□□□ -0.68
PRPF40A-211ENST00000493468 OR2S2Q9NQN1 319 aa10.79□□□□□ -0.68
PRPF40A-211ENST00000493468 ETAA1Q9NY74 926 aa10.79□□□□□ -0.68
PRPF40A-211ENST00000493468 SAA2-SAA4A0A096LPE2 208 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 A0A0G2JLM5 398 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 C13orf42A0A1B0GVH6 325 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 IZUMO1RA6ND01 250 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 J3QLW9 94 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 FCN1O00602 326 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 CA11O75493 328 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 SAA2P0DJI9 122 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 ZNF19P17023 458 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 SERPINA2P20848 420 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 SYNJ2BPP57105 145 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 ADARB1P78563 741 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 FLOT2Q14254 428 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 PLGLAQ15195 96 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 ZNF562Q6V9R5 426 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 PRR18Q8N4B5 295 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 ACBD7Q8N6N7 88 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 POC5Q8NA72 575 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 LFNGQ8NES3 379 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 OR4K15Q8NH41 348 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 OR5AK2Q8NH90 309 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 GATAD1Q8WUU5 269 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 RGP1Q92546 391 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 MRPL48Q96GC5 212 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 RDH12Q96NR8 316 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 MYCBPQ99417 103 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 NEURL2Q9BR09 285 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 FAM103A1Q9BTL3 118 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 MBNL3Q9NUK0 354 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 ING4Q9UNL4 249 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 GAB2Q9UQC2 676 aa10.78□□□□□ -0.68
PRPF40A-211ENST00000493468 OR5H14A6NHG9 310 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 MCRIP1C9JLW8 97 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 G3V2T6 193 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 YPEL1O60688 119 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 SC5DO75845 299 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 RBBP9O75884 186 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 OR2A4O95047 310 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 FADS2O95864 444 aaKnown RBP10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 GTF2F2P13984 249 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 RCC1P18754 421 aaPredicted RBP10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 HTD2P86397 168 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 MRPL28Q13084 256 aaKnown RBP10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 GNMTQ14749 295 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 TATDN3Q17R31 274 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 FAM131AQ6UXB0 335 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 SYS1Q8N2H4 156 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 RPP25LQ8N5L8 163 aaKnown RBP10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 YPEL2Q96QA6 119 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 S100A13Q99584 98 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 RNF5Q99942 180 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 THTPAQ9BU02 230 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 GABARAPL3Q9BY60 117 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 TAF9BQ9HBM6 251 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 SLC2A8Q9NY64 477 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 TAS2R4Q9NYW5 299 aa10.77□□□□□ -0.69
PRPF40A-211ENST00000493468 FSTP19883 344 aa10.76□□□□□ -0.69
PRPF40A-211ENST00000493468 ZNF93P35789 620 aaPredicted RBP10.76□□□□□ -0.69
PRPF40A-211ENST00000493468 PPP1CCP36873 323 aaKnown RBP10.76□□□□□ -0.69
PRPF40A-211ENST00000493468 OR3A3P47888 321 aa10.76□□□□□ -0.69
PRPF40A-211ENST00000493468 ALDH3A2P51648 485 aa10.76□□□□□ -0.69
PRPF40A-211ENST00000493468 TRUB1Q8WWH5 349 aaKnown RBP10.76□□□□□ -0.69
PRPF40A-211ENST00000493468 MRPS24Q96EL2 167 aaKnown RBP10.76□□□□□ -0.69
PRPF40A-211ENST00000493468 CIB1Q99828 191 aa10.76□□□□□ -0.69
PRPF40A-211ENST00000493468 PDCD1LG2Q9BQ51 273 aa10.76□□□□□ -0.69
PRPF40A-211ENST00000493468 SRD5A3Q9H8P0 318 aa10.76□□□□□ -0.69
PRPF40A-211ENST00000493468 TMEM138Q9NPI0 162 aa10.76□□□□□ -0.69
PRPF40A-211ENST00000493468 ANKRD34BA5PLL1 514 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 CXorf65A6NEN9 183 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 AIREO43918 545 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 T-ENOLP0DO92 83 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 AADACP22760 399 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 MC5RP33032 325 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 GPR176Q14439 515 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 ATP6AP1Q15904 470 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 SLC25A30Q5SVS4 291 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 DDI2Q5TDH0 399 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 ZDHHC13Q8IUH4 622 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 DEFB125Q8N687 156 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 OR52L2PQ8NGH6 319 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 GHSRQ92847 366 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 IFI27L2Q9H2X8 130 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 KCNIP1Q9NZI2 227 aa10.75□□□□□ -0.69
PRPF40A-211ENST00000493468 PEMTQ9UBM1 199 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms