RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	ARPC1B	O15143	372 aa	Known RBP	4	□□□□□ -1.77
SEC13-219	ENST00000492602	ZNF737	O75373	536 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	SRSF10	O75494	262 aa	Known RBP	4	□□□□□ -1.77
SEC13-219	ENST00000492602	SCAF4	O95104	1147 aa	Known RBP	4	□□□□□ -1.77
SEC13-219	ENST00000492602	APOL3	O95236	402 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	HTR3B	O95264	441 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	OR2H2	O95918	312 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	IGHA1	P01876	353 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	CSN2	P05814	226 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	GTF2F2	P13984	249 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	DCK	P27707	260 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	GLP1R	P43220	463 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	MFAP2	P55001	183 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	ZIK1	Q3SY52	487 aa	Predicted RBP	4	□□□□□ -1.77
SEC13-219	ENST00000492602	ATAD3C	Q5T2N8	411 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	ZNF691	Q5VV52	312 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	TTC23	Q5W5X9	447 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	LPCAT4	Q643R3	524 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	RPL22L1	Q6P5R6	122 aa	Known RBP	4	□□□□□ -1.77
SEC13-219	ENST00000492602	TRAT1	Q6PIZ9	186 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602		Q6ZWC4	215 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	MOB3B	Q86TA1	216 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	LAX1	Q8IWV1	398 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	OR8H3	Q8N146	312 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	SYS1	Q8N2H4	156 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	SETD9	Q8NE22	299 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	PXT1	Q8NFP0	134 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	OR8H1	Q8NGG4	311 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	OR13C9	Q8NGT0	318 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	UBALD1	Q8TB05	177 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	FBLIM1	Q8WUP2	373 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	TNFAIP8L1	Q8WVP5	186 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4	□□□□□ -1.77
SEC13-219	ENST00000492602	MRPS24	Q96EL2	167 aa	Known RBP	4	□□□□□ -1.77
SEC13-219	ENST00000492602	C4orf36	Q96KX1	117 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	MBOAT4	Q96T53	435 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	S1PR3	Q99500	378 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	ALG8	Q9BVK2	526 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	RBFOX1	Q9NWB1	397 aa	Known RBP	4	□□□□□ -1.77
SEC13-219	ENST00000492602	ZNF107	Q9UII5	783 aa	Predicted RBP	4	□□□□□ -1.77
SEC13-219	ENST00000492602	ZNF580	Q9UK33	172 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	TRAPPC2L	Q9UL33	140 aa		4	□□□□□ -1.77
SEC13-219	ENST00000492602	AGRN	O00468	2067 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	IGHV4-4	A0A075B6R2	117 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	TRAV41	A0A0B4J266	112 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	LOC100130705	A0A1B0GUX0	176 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602		A0A1W2PN81	502 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	TMEM82	A0PJX8	343 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	TMEM30CP	A0ZSE6	113 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	FAM90A10P	A6NDY2	464 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	ZNF785	A8K8V0	405 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602		J3QR06	171 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	LGALS9	O00182	355 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	TXNL1	O43396	289 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	CA11	O75493	328 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	OR7C1	O76099	320 aa	Predicted RBP	3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	ALPL	P05186	524 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	CSN3	P07498	182 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602		P0DMU3	169 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	FAM231A	P0DMU4	169 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	FAM231C	P0DMU5	169 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	PRB4	P10163	310 aa	Predicted RBP	3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	SLC2A2	P11168	524 aa	Predicted RBP	3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	ZP3	P21754	424 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	MAPK3	P27361	379 aa	Predicted RBP	3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	CD34	P28906	385 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	BDKRB2	P30411	391 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	ZNF93	P35789	620 aa	Predicted RBP	3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	CHRNA7	P36544	502 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	GLIPR1	P48060	266 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	SYNJ2BP	P57105	145 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	TAS2R43	P59537	309 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	ZNF91	Q05481	1191 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	EBI3	Q14213	229 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	IL13RA2	Q14627	380 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	GUCA2B	Q16661	112 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	TMEM30B	Q3MIR4	351 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	CD300E	Q496F6	205 aa	Predicted RBP	3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	C6orf183	Q5T699	404 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	ELP2	Q6IA86	826 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602		Q6ZR54	194 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	SSX6	Q7RTT6	188 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	SPATA12	Q7Z6I5	190 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	LYPD1	Q8N2G4	141 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	PRSS35	Q8N3Z0	413 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	CBR4	Q8N4T8	237 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	PARP16	Q8N5Y8	322 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	OR52N4	Q8NGI2	321 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	OR51A2	Q8NGJ7	313 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	OR5D18	Q8NGL1	313 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	OR2K2	Q8NGT1	345 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	OR2T10	Q8NGZ9	312 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	OR52N1	Q8NH53	320 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	RHOXF1	Q8NHV9	184 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	CNIH3	Q8TBE1	160 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	PYDC1	Q8WXC3	89 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	ARL11	Q969Q4	196 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	RFT1	Q96AA3	541 aa		3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	ADAT3	Q96EY9	351 aa	Predicted RBP	3.99	□□□□□ -1.77
SEC13-219	ENST00000492602	CYYR1	Q96J86	154 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms