RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 FAM90A7PA6NKC0 464 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 FAM90A12PA8MX19 464 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 FAM90A5PA8MXJ8 464 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 FAM90A23PA8MXZ1 464 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 GABARAPH6UMI1 98 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 MFNGO00587 321 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 SOCS1O15524 211 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 RBP4P02753 201 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 FAM90A15PP0C7V4 464 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 FAM90A13PP0C7W8 464 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 FAM90A14PP0C7W9 464 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 FAM90A24PP0C7X0 464 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 HIST1H1DP16402 221 aaKnown RBP12.37□□□□□ -0.43
CDK11A-220ENST00000492390 GABRR1P24046 479 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 DLX6P56179 175 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 IL13RA2Q14627 380 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 LINC00596Q86U02 117 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 FAM58AQ8N1B3 248 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 ZNF561Q8N587 486 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 CHST4Q8NCG5 386 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 EMG1Q92979 244 aaKnown RBP12.37□□□□□ -0.43
CDK11A-220ENST00000492390 RAB3CQ96E17 227 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 CITED4Q96RK1 184 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 HES4Q9HCC6 221 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 ZFP57Q9NU63 452 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 SMAD5-AS1Q9Y6J3 95 aa12.37□□□□□ -0.43
CDK11A-220ENST00000492390 PSMB11A5LHX3 300 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 GEMIN2O14893 280 aaKnown RBP12.36□□□□□ -0.43
CDK11A-220ENST00000492390 NXPH2O95156 264 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 GSTP1P09211 210 aaKnown RBP12.36□□□□□ -0.43
CDK11A-220ENST00000492390 PTHLHP12272 177 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 PRKACAP17612 351 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 BLVRBP30043 206 aaPredicted RBP12.36□□□□□ -0.43
CDK11A-220ENST00000492390 ECI1P42126 302 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 TMEM50BP56557 158 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 MPV17LQ2QL34 196 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 ZNF260Q3ZCT1 412 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 RNASE12Q5GAN4 147 aaKnown RBP12.36□□□□□ -0.43
CDK11A-220ENST00000492390 PLAC9Q5JTB6 97 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 C9orf66Q5T8R8 295 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 TRIQKQ629K1 86 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 STEAP3Q658P3 488 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 SIGIRRQ6IA17 410 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 RTN4RL2Q86UN3 420 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 LYSMD2Q8IV50 215 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 SBSPONQ8IVN8 264 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 RASL12Q9NYN1 266 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 IL36RNQ9UBH0 155 aa12.36□□□□□ -0.43
CDK11A-220ENST00000492390 TMEM235A6NFC5 223 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 RFPL4AA6NLU0 287 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 NUDT19A8MXV4 375 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 RFPL4AL1F8VTS6 287 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 SULT1C2O00338 296 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 IGHV1-8P0DP01 117 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 GNB3P16520 340 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 LUMP51884 338 aaPredicted RBP12.35□□□□□ -0.43
CDK11A-220ENST00000492390 SNU13P55769 128 aaKnown RBP12.35□□□□□ -0.43
CDK11A-220ENST00000492390 ARL6IP1Q15041 203 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 CDNFQ49AH0 187 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 ADAMTSL5Q6ZMM2 481 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 CD177Q8N6Q3 437 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 OR52I2Q8NH67 350 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 FCAMRQ8WWV6 532 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 ARHGAP5-AS1Q96IT6 56 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 SLC25A33Q9BSK2 321 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 THAP7Q9BT49 309 aaPredicted RBP12.35□□□□□ -0.43
CDK11A-220ENST00000492390 PECRQ9BY49 303 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 SCPEP1Q9HB40 452 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 ZNF581Q9P0T4 197 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 HSF4Q9ULV5 492 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 KCNK7Q9Y2U2 307 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 RBMX2Q9Y388 322 aaKnown RBP12.35□□□□□ -0.43
CDK11A-220ENST00000492390 HYDINQ4G0P3 5121 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 STARD9Q9P2P6 4700 aa12.35□□□□□ -0.43
CDK11A-220ENST00000492390 SERPINE3A8MV23 424 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 PDCD6O75340 191 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 OR2F2O95006 317 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 CD3GP09693 182 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 ZNF728P0DKX0 622 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 PRDX2P32119 198 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 PRSS3P35030 304 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 PNLIPRP3Q17RR3 467 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 SMIM21Q3B7S5 101 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 SPIN3Q5JUX0 258 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 HACD4Q5VWC8 232 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 ACP7Q6ZNF0 438 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 C18orf65Q6ZTR6 163 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 KLHL30-AS1Q8NEE0 82 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 GPX8Q8TED1 209 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 RBM14Q96PK6 669 aaKnown RBP12.34□□□□□ -0.43
CDK11A-220ENST00000492390 NEDD4LQ96PU5 975 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 IFT22Q9H7X7 185 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 RCC2Q9P258 522 aaKnown RBP12.34□□□□□ -0.43
CDK11A-220ENST00000492390 ZNF256Q9Y2P7 627 aaPredicted RBP12.34□□□□□ -0.43
CDK11A-220ENST00000492390 CSMD3Q7Z407 3707 aa12.34□□□□□ -0.43
CDK11A-220ENST00000492390 M0QZK8 103 aa12.33□□□□□ -0.44
CDK11A-220ENST00000492390 LANCL1O43813 399 aa12.33□□□□□ -0.44
CDK11A-220ENST00000492390 CA11O75493 328 aa12.33□□□□□ -0.44
CDK11A-220ENST00000492390 OR7C1O76099 320 aaPredicted RBP12.33□□□□□ -0.44
CDK11A-220ENST00000492390 AMY1AP04745 511 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms