RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 CFHR3Q02985 330 aa6.87□□□□□ -1.31
NUP50-217ENST00000491860 RCN1Q15293 331 aa6.87□□□□□ -1.31
NUP50-217ENST00000491860 TRAM1Q15629 374 aa6.87□□□□□ -1.31
NUP50-217ENST00000491860 HMGN3Q15651 99 aa6.87□□□□□ -1.31
NUP50-217ENST00000491860 ACSM3Q53FZ2 586 aa6.87□□□□□ -1.31
NUP50-217ENST00000491860 OGFRL1Q5TC84 451 aaPredicted RBP6.87□□□□□ -1.31
NUP50-217ENST00000491860 LYPD6Q86Y78 171 aa6.87□□□□□ -1.31
NUP50-217ENST00000491860 BPIFB6Q8NFQ5 453 aa6.87□□□□□ -1.31
NUP50-217ENST00000491860 OR1L1Q8NH94 360 aa6.87□□□□□ -1.31
NUP50-217ENST00000491860 MRPL30Q8TCC3 161 aaKnown RBP6.87□□□□□ -1.31
NUP50-217ENST00000491860 EDARADDQ8WWZ3 215 aa6.87□□□□□ -1.31
NUP50-217ENST00000491860 ORAI1Q96D31 301 aa6.87□□□□□ -1.31
NUP50-217ENST00000491860 UBE2E2Q96LR5 201 aa6.87□□□□□ -1.31
NUP50-217ENST00000491860 URM1Q9BTM9 101 aaKnown RBP6.87□□□□□ -1.31
NUP50-217ENST00000491860 TM2D1Q9BX74 207 aa6.87□□□□□ -1.31
NUP50-217ENST00000491860 ZNF581Q9P0T4 197 aa6.87□□□□□ -1.31
NUP50-217ENST00000491860 DNAH9Q9NYC9 4486 aa6.87□□□□□ -1.31
NUP50-217ENST00000491860 OR5H14A6NHG9 310 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 ARPC1BO15143 372 aaKnown RBP6.86□□□□□ -1.31
NUP50-217ENST00000491860 SLC31A2O15432 143 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 NBR2O15453 112 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 RBBP9O75884 186 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 RPLP1P05386 114 aaKnown RBP6.86□□□□□ -1.31
NUP50-217ENST00000491860 CDK1P06493 297 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 OR8U8P0C7N1 319 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 SRMP19623 302 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 CHATP28329 748 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 HTR2CP28335 458 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 CD40LGP29965 261 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 F2RL1P55085 397 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 ACTBP60709 375 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 RUNX1Q01196 453 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 GABPB1Q06547 395 aaPredicted RBP6.86□□□□□ -1.31
NUP50-217ENST00000491860 TMEM267Q0VDI3 215 aaPredicted RBP6.86□□□□□ -1.31
NUP50-217ENST00000491860 FHL3Q13643 280 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 SPHARQ15513 63 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 HSD17B12Q53GQ0 312 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 NKAPLQ5M9Q1 402 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 RBM48Q5RL73 367 aaKnown RBP6.86□□□□□ -1.31
NUP50-217ENST00000491860 C1orf100Q5SVJ3 147 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 C6orf141Q5SZD1 244 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 SIGIRRQ6IA17 410 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 PYHIN1Q6K0P9 492 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 LCNL1Q6ZST4 164 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 ZNF833PQ6ZTB9 187 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 NPBQ8NG41 125 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 OR6M1Q8NGM8 313 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 UBALD1Q8TB05 177 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 RAX2Q96IS3 184 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 KCTD7Q96MP8 289 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 WWC2-AS2Q96NR7 200 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 RNF5Q99942 180 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 NABP2Q9BQ15 211 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 OR51J1Q9H342 316 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 PLEKHJ1Q9NW61 149 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 FKBP14Q9NWM8 211 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 RNF150Q9ULK6 438 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 VSIG4Q9Y279 399 aa6.86□□□□□ -1.31
NUP50-217ENST00000491860 TRBV6-6A0A0A6YYG2 114 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 LINC01548A6NM66 108 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 ZNF736B4DX44 427 aaPredicted RBP6.85□□□□□ -1.31
NUP50-217ENST00000491860 SEC14L6B5MCN3 397 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 ARL6IP5O75915 188 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 NDUFA3O95167 84 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 CD37P11049 281 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 MYF6P23409 242 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 PSMD7P51665 324 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 C5orf64Q2M2E5 130 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 ZNF660Q6AZW8 331 aaPredicted RBP6.85□□□□□ -1.31
NUP50-217ENST00000491860 LIN54Q6MZP7 749 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 C11orf87Q6NUJ2 197 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 OR52L2PQ8NGH6 319 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 MYOZ3Q8TDC0 251 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 UFD1Q92890 307 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 FAM46BQ96A09 425 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 HSPB9Q9BQS6 159 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 CENPOQ9BU64 300 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 CHMP1AQ9HD42 196 aaPredicted RBP6.85□□□□□ -1.31
NUP50-217ENST00000491860 ISYNA1Q9NPH2 558 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 SLC23A1Q9UHI7 598 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 HSF4Q9ULV5 492 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 TPRKBQ9Y3C4 175 aa6.85□□□□□ -1.31
NUP50-217ENST00000491860 SAA2-SAA4A0A096LPE2 208 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 TRAV41A0A0B4J266 112 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 TMEM14DPA8MWL7 114 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 SLC22A1O15245 554 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 HSPA12AO43301 675 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 SPDEFO95238 335 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 NAPSAO96009 420 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 GNAO1P09471 354 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 UCHL1P09936 223 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 SAA2P0DJI9 122 aaPredicted RBP6.84□□□□□ -1.31
NUP50-217ENST00000491860 SLC2A2P11168 524 aaPredicted RBP6.84□□□□□ -1.31
NUP50-217ENST00000491860 ARSBP15848 533 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 ZBTB25P24278 435 aa6.84□□□□□ -1.31
NUP50-217ENST00000491860 BLVRBP30043 206 aaPredicted RBP6.84□□□□□ -1.31
NUP50-217ENST00000491860 PPIFP30405 207 aaKnown RBP6.84□□□□□ -1.31
NUP50-217ENST00000491860 PPP1CCP36873 323 aaKnown RBP6.84□□□□□ -1.31
NUP50-217ENST00000491860 CRIP2P52943 208 aaPredicted RBP6.84□□□□□ -1.31
NUP50-217ENST00000491860 MRPS15P82914 257 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms