RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 DYSFO75923 2080 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 IGHV4-61A0A0C4DH41 118 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 J3QW42 95 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 CA11O75493 328 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 GLAP06280 429 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 FABP1P07148 127 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 RAC2P15153 192 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 SLC25A16P16260 332 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 GLP1RP43220 463 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 ZNF283Q8N7M2 679 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 OR5L1Q8NGL2 311 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 OR2AE1Q8NHA4 323 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 SPTSSAQ969W0 71 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 PIMREGQ9BSJ6 248 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 SOX7Q9BT81 388 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 TREM2Q9NZC2 230 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 ZNF319Q9P2F9 582 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 METTL1Q9UBP6 276 aaKnown RBP7.89□□□□□ -1.15
BRCA1-219ENST00000491747 BORCS7-ASMTA0A0B4J1R7 106 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 IGKV1-9A0A0C4DH69 117 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 H0YL77 283 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 NDUFS8O00217 210 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 CTSDP07339 412 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-219ENST00000491747 ADH4P08319 380 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 SEC11BP0C7V7 166 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 SNCAP37840 140 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 ZNF92Q03936 586 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 LOXL1Q08397 574 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-219ENST00000491747 AWAT1Q58HT5 328 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 FAM57BQ71RH2 274 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 SEMA6DQ8NFY4 1073 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 OR5D18Q8NGL1 313 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 RDH5Q92781 318 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 PECRQ9BY49 303 aa7.89□□□□□ -1.15
BRCA1-219ENST00000491747 LSM5Q9Y4Y9 91 aaKnown RBP7.89□□□□□ -1.15
BRCA1-219ENST00000491747 C7orf77A4D0Y5 90 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 FOXI3A8MTJ6 420 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-219ENST00000491747 E5RGE8 158 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 M0R036 132 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 WNT9BO14905 357 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 SNRNP70P08621 437 aaKnown RBP7.88□□□□□ -1.15
BRCA1-219ENST00000491747 SERPINA2P20848 420 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 IL2RGP31785 369 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 ZNF616Q08AN1 781 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 GUK1Q16774 197 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 MIDNQ504T8 468 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 ETV3LQ6ZN32 361 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 OR14K1Q8NGZ2 314 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 MAFIPQ8WZ33 124 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 ZNF2Q9BSG1 426 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-219ENST00000491747 TM2D1Q9BX74 207 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 SMIM3Q9BZL3 60 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 EIF5A2Q9GZV4 153 aaKnown RBP7.88□□□□□ -1.15
BRCA1-219ENST00000491747 KCNIP3Q9Y2W7 256 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 NSG2Q9Y328 171 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 ABCA2Q9BZC7 2435 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 LRP5LA4QPB2 252 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 CRYM-AS1A6NIL9 109 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 IQCF6A8MYZ5 107 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 MLNRO43193 412 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 SCGB1D2O95969 90 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 CD55P08174 381 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 USF1P22415 310 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-219ENST00000491747 AKR1C3P42330 323 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 RAB5CP51148 216 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 FABP9Q0Z7S8 132 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 KRBOX4Q5JUW0 171 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 GGNBP1Q5YKI7 109 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 SLC16A13Q7RTY0 426 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 OR8G5Q8NG78 346 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 OR2Z1Q8NG97 314 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 PP6455Q8WZ26 134 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 PBDC1Q9BVG4 233 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 CHODLQ9H9P2 273 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 NIT2Q9NQR4 276 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 DECR2Q9NUI1 292 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 DCAF16Q9NXF7 216 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 ZDHHC8Q9ULC8 765 aa7.88□□□□□ -1.15
BRCA1-219ENST00000491747 ANK3Q12955 4377 aaKnown RBP7.87□□□□□ -1.15
BRCA1-219ENST00000491747 IGHV1-69-2A0A0G2JMI3 117 aa7.87□□□□□ -1.15
BRCA1-219ENST00000491747 LINC00587B1AMM8 73 aa7.87□□□□□ -1.15
BRCA1-219ENST00000491747 RAB5AP20339 215 aa7.87□□□□□ -1.15
BRCA1-219ENST00000491747 CAMLGP49069 296 aa7.87□□□□□ -1.15
BRCA1-219ENST00000491747 MRPS11P82912 194 aaKnown RBP7.87□□□□□ -1.15
BRCA1-219ENST00000491747 TNFAIP6P98066 277 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-219ENST00000491747 RHEBQ15382 184 aa7.87□□□□□ -1.15
BRCA1-219ENST00000491747 TMEM249Q2WGJ8 235 aa7.87□□□□□ -1.15
BRCA1-219ENST00000491747 RBMS3Q6XE24 437 aaKnown RBP7.87□□□□□ -1.15
BRCA1-219ENST00000491747 OR10AD1Q8NGE0 317 aa7.87□□□□□ -1.15
BRCA1-219ENST00000491747 SGK3Q96BR1 496 aa7.87□□□□□ -1.15
BRCA1-219ENST00000491747 PGAM5Q96HS1 289 aa7.87□□□□□ -1.15
BRCA1-219ENST00000491747 REPIN1Q9BWE0 567 aaKnown RBP7.87□□□□□ -1.15
BRCA1-219ENST00000491747 ARV1Q9H2C2 271 aa7.87□□□□□ -1.15
BRCA1-219ENST00000491747 SAP30LQ9HAJ7 183 aa7.87□□□□□ -1.15
BRCA1-219ENST00000491747 SEBOXQ9HB31 216 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-219ENST00000491747 ELL3Q9HB65 397 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-219ENST00000491747 SPACA1Q9HBV2 294 aa7.87□□□□□ -1.15
BRCA1-219ENST00000491747 GSN-AS1Q9NRJ2 163 aa7.87□□□□□ -1.15
BRCA1-219ENST00000491747 PLEKHJ1Q9NW61 149 aa7.87□□□□□ -1.15
BRCA1-219ENST00000491747 PLA2G2EQ9NZK7 142 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms