RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 H3BUI4 141 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 AP4M1O00189 453 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 SPINT2O43291 252 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 PDCD6O75340 191 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 PROP1O75360 226 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 CDK1P06493 297 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 CD3GP09693 182 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 FUT3P21217 361 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 CD1BP29016 333 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 SOX6P35712 828 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 MYCNOSP40205 109 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 ECI1P42126 302 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 MAP2K4P45985 399 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 ZNF137PP52743 207 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 AQP4P55087 323 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 ACTBP60709 375 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 SLC35B1P78383 322 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 QRFPP83859 136 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 CD69Q07108 199 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 PNLIPRP3Q17RR3 467 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 LIPKQ5VXJ0 399 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 TEX38Q6PEX7 206 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 FAM131AQ6UXB0 335 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 TMEM91Q6ZNR0 172 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 SLC16A12Q6ZSM3 486 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 CEACAM19Q7Z692 300 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 LINC00596Q86U02 117 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 SETD9Q8NE22 299 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 CLCC1Q96S66 551 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 ABHD14AQ9BUJ0 271 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 FBXL15Q9H469 300 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 TPSG1Q9NRR2 321 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 AK3Q9UIJ7 227 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 RNF150Q9ULK6 438 aa6.93□□□□□ -1.3
HDAC3-211ENST00000491581 AK6Q9Y3D8 172 aaKnown RBP6.93□□□□□ -1.3
HDAC3-211ENST00000491581 HUWE1Q7Z6Z7 4374 aaKnown RBP6.92□□□□□ -1.3
HDAC3-211ENST00000491581 IRGMA1A4Y4 181 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 SMIM30A4D0T7 59 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 ZNF780AO75290 641 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-211ENST00000491581 IGHG4P01861 327 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 SCTP09683 121 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 EGR2P11161 476 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-211ENST00000491581 PSMB8P28062 276 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 PPIFP30405 207 aaKnown RBP6.92□□□□□ -1.3
HDAC3-211ENST00000491581 SLURP1P55000 103 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 MED22Q15528 200 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 HMGN3Q15651 99 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 ECSCRQ19T08 205 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 C6orf183Q5T699 404 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 ZNF833PQ6ZTB9 187 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 SVOPQ8N4V2 548 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 C8orf31Q8N9H6 132 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 OR11H1Q8NG94 326 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 OR51D1Q8NGF3 324 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 MAFIPQ8WZ33 124 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 MYCBPQ99417 103 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-211ENST00000491581 LPAR5Q9H1C0 372 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 ZFP57Q9NU63 452 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 PLCXD1Q9NUJ7 323 aa6.92□□□□□ -1.3
HDAC3-211ENST00000491581 CNOT2Q9NZN8 540 aaKnown RBP6.92□□□□□ -1.3
HDAC3-211ENST00000491581 A0A0B4J203 849 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 IGKV1-6A0A0C4DH72 117 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 SHISA3A0PJX4 238 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 TMEM14DPA8MWL7 114 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 SEC14L6B5MCN3 397 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 CASQ2O14958 399 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-211ENST00000491581 LANCL1O43813 399 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 IGHV3-11P01762 117 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 HSMCR30P0CW71 290 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 CT45A6P0DMU7 189 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 CT45A5P0DMU8 189 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 CT45A7P0DMV0 189 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 VDAC1P21796 283 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 IL3RAP26951 378 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 TMEM50BP56557 158 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 RPS27AP62979 156 aaKnown RBP6.91□□□□□ -1.3
HDAC3-211ENST00000491581 FOXE3Q13461 319 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 GPR176Q14439 515 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 IRF3Q14653 427 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 KIR2DS1Q14954 304 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 MOGAT2Q3SYC2 334 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 ZNF260Q3ZCT1 412 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 CXorf66Q5JRM2 361 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-211ENST00000491581 C1orf100Q5SVJ3 147 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 C10orf67Q8IYJ2 551 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 PACRGLQ8N7B6 248 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 ZNF491Q8N8L2 437 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 MRPS24Q96EL2 167 aaKnown RBP6.91□□□□□ -1.3
HDAC3-211ENST00000491581 C5orf30Q96GV9 206 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 MS4A10Q96PG2 267 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 B9D2Q9BPU9 175 aa6.91□□□□□ -1.3
HDAC3-211ENST00000491581 CHMP1AQ9HD42 196 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-211ENST00000491581 ELF5Q9UKW6 265 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-211ENST00000491581 LSM4Q9Y4Z0 139 aaKnown RBP6.91□□□□□ -1.3
HDAC3-211ENST00000491581 IGHV4OR15-8A0A075B7B6 117 aa6.9□□□□□ -1.3
HDAC3-211ENST00000491581 A0A087WW49 117 aa6.9□□□□□ -1.3
HDAC3-211ENST00000491581 A0A1W2PN81 502 aa6.9□□□□□ -1.3
HDAC3-211ENST00000491581 FOXI3A8MTJ6 420 aaPredicted RBP6.9□□□□□ -1.3
HDAC3-211ENST00000491581 I3L521 148 aa6.9□□□□□ -1.3
HDAC3-211ENST00000491581 SLC22A1O15245 554 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms