RNA–Protein interactions for RNA: ENST00000491460.5

CPA1-208, Transcript of carboxypeptidase A1, human

TSL 2

Gene CPA1, Length 1,063 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPA1-208	ENST00000491460	ALX4	Q9H161	411 aa	Predicted RBP	11.16	□□□□□ -0.62
CPA1-208	ENST00000491460	MBNL3	Q9NUK0	354 aa	Known RBP	11.16	□□□□□ -0.62
CPA1-208	ENST00000491460	STARD9	Q9P2P6	4700 aa		11.16	□□□□□ -0.62
CPA1-208	ENST00000491460	DNAH1	Q9P2D7	4330 aa		11.16	□□□□□ -0.62
CPA1-208	ENST00000491460	LOC100130705	A0A1B0GUX0	176 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460		A0A1W2PN81	502 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	MAGEA13P	A6NCF6	341 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	TRIM64C	A6NLI5	447 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	OGG1	O15527	345 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	FST	P19883	344 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	FUT3	P21217	361 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	CHRNA7	P36544	502 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	PPP1CC	P36873	323 aa	Known RBP	11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	ETV1	P50549	477 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	CRIP2	P52943	208 aa	Predicted RBP	11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	HTD2	P86397	168 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	PITPNA	Q00169	270 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460		Q499Y3	187 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	OR2G6	Q5TZ20	316 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	AWAT2	Q6E213	333 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	PYHIN1	Q6K0P9	492 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	ZNF833P	Q6ZTB9	187 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	ODF3L1	Q8IXM7	274 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	OR52L2P	Q8NGH6	319 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	OR13C5	Q8NGS8	318 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	APH1B	Q8WW43	257 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	RITA1	Q96K30	269 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	OR4C12	Q96R67	309 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	C9orf16	Q9BUW7	83 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	SELENOI	Q9C0D9	397 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	BABAM2	Q9NXR7	383 aa		11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	FOXA2	Q9Y261	457 aa	Predicted RBP	11.15	□□□□□ -0.62
CPA1-208	ENST00000491460	IGHV4OR15-8	A0A075B7B6	117 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460		A0A087WW49	117 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	IRGM	A1A4Y4	181 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	UBE2QL1	A1L167	161 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460		H3BNX3	289 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	ARPC1B	O15143	372 aa	Known RBP	11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	LDLRAD4	O15165	306 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	YPEL1	O60688	119 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	MAS1	P04201	325 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	MGMT	P16455	207 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	NDP	Q00604	133 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	YIF1B	Q5BJH7	314 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	C19orf54	Q5BKX5	351 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	LY6G6F	Q5SQ64	297 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	FAM71F2	Q6NXP2	309 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	CDH26	Q8IXH8	852 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	OR2AK2	Q8NG84	335 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	GHSR	Q92847	366 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	ISOC1	Q96CN7	298 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	FLYWCH2	Q96CP2	140 aa	Known RBP	11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	RDH12	Q96NR8	316 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	YPEL2	Q96QA6	119 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	TM2D3	Q9BRN9	247 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	BANF2	Q9H503	90 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	TPSG1	Q9NRR2	321 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	RNF150	Q9ULK6	438 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	LRRC42	Q9Y546	428 aa		11.14	□□□□□ -0.63
CPA1-208	ENST00000491460	TRAV8-7	A0A075B6U6	113 aa		11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	SAA2-SAA4	A0A096LPE2	208 aa		11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	SOX15	O60248	233 aa		11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	PDCD6	O75340	191 aa		11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	CRTAP	O75718	401 aa	Predicted RBP	11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	SAA2	P0DJI9	122 aa	Predicted RBP	11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	MYL12A	P19105	171 aa		11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	OR3A3	P47888	321 aa		11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	PLGLA	Q15195	96 aa		11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	ZFAND6	Q6FIF0	208 aa		11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	LYPD6	Q86Y78	171 aa		11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	MRPL30	Q8TCC3	161 aa	Known RBP	11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	ABHD5	Q8WTS1	349 aa		11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	GALM	Q96C23	342 aa		11.13	□□□□□ -0.63
CPA1-208	ENST00000491460		Q96M66	194 aa		11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	ELOVL1	Q9BW60	279 aa		11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	FBXO7	Q9Y3I1	522 aa		11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	A3GALT2	U3KPV4	340 aa		11.13	□□□□□ -0.63
CPA1-208	ENST00000491460	RRH	O14718	337 aa		11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	HSPA12A	O43301	675 aa		11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	HSPB1	P04792	205 aa	Known RBP	11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	IGHV4-30-4	P0DP06	118 aa		11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	CD40LG	P29965	261 aa		11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	CX3CL1	P78423	397 aa		11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	MED21	Q13503	144 aa		11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	SMN1	Q16637	294 aa	Known RBP	11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	LRRC36	Q1X8D7	754 aa		11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	DMKN	Q6E0U4	476 aa	Predicted RBP	11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	CD200R1L	Q6Q8B3	271 aa		11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	FAM131A	Q6UXB0	335 aa		11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	SGPP2	Q8IWX5	399 aa		11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	CASTOR1	Q8WTX7	329 aa		11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	IFI27L2	Q9H2X8	130 aa		11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	FBXL15	Q9H469	300 aa		11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	GAR1	Q9NY12	217 aa	Known RBP	11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	PIPOX	Q9P0Z9	390 aa		11.12	□□□□□ -0.63
CPA1-208	ENST00000491460	STEAP1	Q9UHE8	339 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms