RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CDS2O95674 445 aa19.16■□□□□ 0.66
USF3-203ENST00000491165 AKR1C3P42330 323 aa19.16■□□□□ 0.66
USF3-203ENST00000491165 NPBWR2P48146 333 aa19.16■□□□□ 0.66
USF3-203ENST00000491165 DAZAP2Q15038 168 aaPredicted RBP19.16■□□□□ 0.66
USF3-203ENST00000491165 IGSF11Q5DX21 431 aa19.16■□□□□ 0.66
USF3-203ENST00000491165 NUP37Q8NFH4 326 aa19.16■□□□□ 0.66
USF3-203ENST00000491165 CD3EP07766 207 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 AWAT1Q58HT5 328 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 SFT2D1Q8WV19 159 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 TMEM222Q9H0R3 208 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 FAM90A10PA6NDY2 464 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 FAM90A18PA6NE21 464 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 FAM90A16PA6NEW6 464 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 FAM90A20PA6NIJ5 464 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 FAM90A8PA6NJQ4 464 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 FAM90A7PA6NKC0 464 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 FAM90A22PA8MWA6 464 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 FAM90A12PA8MX19 464 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 FAM90A5PA8MXJ8 464 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 FAM90A23PA8MXZ1 464 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 TRDCB7Z8K6 153 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 E7EQL1 145 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 FAM90A15PP0C7V4 464 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 FAM90A13PP0C7W8 464 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 FAM90A14PP0C7W9 464 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 FAM90A24PP0C7X0 464 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 EWSR1Q01844 656 aaKnown RBP eCLIP19.15■□□□□ 0.66
USF3-203ENST00000491165 HABP2Q14520 560 aaPredicted RBP19.15■□□□□ 0.66
USF3-203ENST00000491165 BATF2Q8N1L9 274 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 TMEM204Q9BSN7 226 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 SPACA1Q9HBV2 294 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 RNF115Q9Y4L5 304 aa19.15■□□□□ 0.66
USF3-203ENST00000491165 CD300LBA8K4G0 201 aa19.14■□□□□ 0.65
USF3-203ENST00000491165 MBNL2Q5VZF2 373 aaKnown RBP19.14■□□□□ 0.65
USF3-203ENST00000491165 Q6ZS49 121 aa19.14■□□□□ 0.65
USF3-203ENST00000491165 Q8NFD4 153 aa19.14■□□□□ 0.65
USF3-203ENST00000491165 FAM222BQ8WU58 562 aa19.14■□□□□ 0.65
USF3-203ENST00000491165 HIST1H2BAQ96A08 127 aa19.14■□□□□ 0.65
USF3-203ENST00000491165 PBDC1Q9BVG4 233 aa19.14■□□□□ 0.65
USF3-203ENST00000491165 ATP23Q9Y6H3 246 aa19.14■□□□□ 0.65
USF3-203ENST00000491165 SNRNP70P08621 437 aaKnown RBP19.13■□□□□ 0.65
USF3-203ENST00000491165 RAC2P15153 192 aa19.13■□□□□ 0.65
USF3-203ENST00000491165 LMO1P25800 156 aa19.13■□□□□ 0.65
USF3-203ENST00000491165 OR2C3Q8N628 320 aa19.13■□□□□ 0.65
USF3-203ENST00000491165 MRPL37Q9BZE1 423 aaKnown RBP19.13■□□□□ 0.65
USF3-203ENST00000491165 DUSP13Q9UII6 198 aa19.13■□□□□ 0.65
USF3-203ENST00000491165 VPS13CQ709C8 3753 aa19.13■□□□□ 0.65
USF3-203ENST00000491165 C7orf77A4D0Y5 90 aa19.13■□□□□ 0.65
USF3-203ENST00000491165 C1orf196B1AJZ1 125 aa19.13■□□□□ 0.65
USF3-203ENST00000491165 GNRHRP30968 328 aa19.13■□□□□ 0.65
USF3-203ENST00000491165 ADIPOQQ15848 244 aa19.13■□□□□ 0.65
USF3-203ENST00000491165 LFNGQ8NES3 379 aa19.13■□□□□ 0.65
USF3-203ENST00000491165 SPIN2AQ99865 258 aa19.13■□□□□ 0.65
USF3-203ENST00000491165 SPIN2BQ9BPZ2 258 aa19.13■□□□□ 0.65
USF3-203ENST00000491165 PAPOLGQ9BWT3 736 aaKnown RBP19.13■□□□□ 0.65
USF3-203ENST00000491165 C11orf1Q9H5F2 150 aa19.13■□□□□ 0.65
USF3-203ENST00000491165 UBE2J1Q9Y385 318 aaPredicted RBP19.13■□□□□ 0.65
USF3-203ENST00000491165 M0R036 132 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 MT-ND4LP03901 98 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 ZNF44P15621 663 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 COL8A1P27658 744 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 ZNF266Q14584 549 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 ZNF718Q3SXZ3 478 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 RNF212Q495C1 297 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 TMEM182Q6ZP80 229 aaPredicted RBP19.12■□□□□ 0.65
USF3-203ENST00000491165 TBC1D26Q86UD7 250 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 ZNF695Q8IW36 515 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 TMEM56Q96MV1 263 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 TUBA4BQ9H853 241 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 TMEM56-RWDD3S4R434 201 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 TK1P04183 234 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 BCL3P20749 454 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 NKX2-1P43699 371 aaPredicted RBP19.12■□□□□ 0.65
USF3-203ENST00000491165 SRSF7Q16629 238 aaKnown RBP eCLIP19.12■□□□□ 0.65
USF3-203ENST00000491165 SPIN3Q5JUX0 258 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 ZNF565Q8N9K5 539 aa19.12■□□□□ 0.65
USF3-203ENST00000491165 GTF3AQ92664 365 aaKnown RBP19.12■□□□□ 0.65
USF3-203ENST00000491165 UMAD1C9J7I0 102 aa19.11■□□□□ 0.65
USF3-203ENST00000491165 K7N7A8 449 aa19.11■□□□□ 0.65
USF3-203ENST00000491165 MEOX2P50222 304 aa19.11■□□□□ 0.65
USF3-203ENST00000491165 RND3P61587 244 aa19.11■□□□□ 0.65
USF3-203ENST00000491165 FAM213BQ8TBF2 198 aa19.11■□□□□ 0.65
USF3-203ENST00000491165 SLAMF9Q96A28 289 aa19.11■□□□□ 0.65
USF3-203ENST00000491165 SLC35B3Q9H1N7 401 aa19.11■□□□□ 0.65
USF3-203ENST00000491165 OPA3Q9H6K4 179 aa19.11■□□□□ 0.65
USF3-203ENST00000491165 Q9N2K0 584 aa19.11■□□□□ 0.65
USF3-203ENST00000491165 IGLV3-9A0A075B6K5 115 aa19.1■□□□□ 0.65
USF3-203ENST00000491165 FAM24AA6NFZ4 105 aa19.1■□□□□ 0.65
USF3-203ENST00000491165 GCH1P30793 250 aa19.1■□□□□ 0.65
USF3-203ENST00000491165 Q6ZR03 302 aa19.1■□□□□ 0.65
USF3-203ENST00000491165 FGF23Q9GZV9 251 aaPredicted RBP19.1■□□□□ 0.65
USF3-203ENST00000491165 ARFGEF3Q5TH69 2177 aa19.1■□□□□ 0.65
USF3-203ENST00000491165 A6NNC1 897 aa19.1■□□□□ 0.65
USF3-203ENST00000491165 IQCF6A8MYZ5 107 aa19.1■□□□□ 0.65
USF3-203ENST00000491165 PITX3O75364 302 aa19.1■□□□□ 0.65
USF3-203ENST00000491165 OR4A8P0C604 315 aa19.1■□□□□ 0.65
USF3-203ENST00000491165 KITLGP21583 273 aa19.1■□□□□ 0.65
USF3-203ENST00000491165 PRDX4Q13162 271 aa19.1■□□□□ 0.65
USF3-203ENST00000491165 C1orf174Q8IYL3 243 aa19.1■□□□□ 0.65
USF3-203ENST00000491165 SAXO1Q8IYX7 474 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms