RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 RNF122Q9H9V4 155 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 P2RY6Q15077 328 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.06□□□□□ -0.64
SHOX2-205ENST00000490689 FAM27BQ5VT28 67 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 RNF166Q96A37 237 aaPredicted RBP11.06□□□□□ -0.64
SHOX2-205ENST00000490689 TPPP3Q9BW30 176 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 HEATR1Q9H583 2144 aaKnown RBP11.06□□□□□ -0.64
SHOX2-205ENST00000490689 POLDIP2Q9Y2S7 368 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 CTXND1A0A1B0GTU2 59 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 HOXA6P31267 233 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 MRPL54Q6P161 138 aaKnown RBP11.06□□□□□ -0.64
SHOX2-205ENST00000490689 OR4C5Q8NGB2 326 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 MRGPRDQ8TDS7 321 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 DTD1Q8TEA8 209 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 TAF15Q92804 592 aaKnown RBP eCLIP11.06□□□□□ -0.64
SHOX2-205ENST00000490689 TMEM38BQ9NVV0 291 aa11.06□□□□□ -0.64
SHOX2-205ENST00000490689 PLXNB3Q9ULL4 1909 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 SLC22A20A6NK97 555 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 SNURFLB1AK76 121 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 SYNGR1O43759 233 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 QRFPP83859 136 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 CALHM1Q8IU99 346 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 PPP1R35Q8TAP8 253 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 RAB24Q969Q5 203 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 C10orf35Q96D05 121 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 ANAPC16Q96DE5 110 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 GLRX2Q9NS18 164 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 NBASA2RRP1 2371 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 DOCK10Q96BY6 2186 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 DUSP3P51452 185 aaPredicted RBP11.05□□□□□ -0.64
SHOX2-205ENST00000490689 RAC3P60763 192 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 RANP62826 216 aaKnown RBP11.05□□□□□ -0.64
SHOX2-205ENST00000490689 ZNF501Q96CX3 271 aaPredicted RBP11.05□□□□□ -0.64
SHOX2-205ENST00000490689 STARD4Q96DR4 205 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 LYZL4Q96KX0 146 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 SRD5A3Q9H8P0 318 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 B3GAT1Q9P2W7 334 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 SERF2P84101 59 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 HERPUD1Q15011 391 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 KIAA1644Q3SXP7 199 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 KMT5CQ86Y97 462 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 DEFB108BQ8NET1 73 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 DEFB127Q9H1M4 99 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 IL36RNQ9UBH0 155 aa11.05□□□□□ -0.64
SHOX2-205ENST00000490689 TRAV38-1A0A0B4J264 116 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 CDIPTO14735 213 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 C11orf42Q8N5U0 333 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 TPRX1Q8N7U7 411 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 DAZAP1Q96EP5 407 aaKnown RBP11.04□□□□□ -0.64
SHOX2-205ENST00000490689 TAAR3PQ9P1P4 343 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 PROB1E7EW31 1015 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 OR8B8Q15620 311 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 C1orf53Q5VUE5 145 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 VSIRQ9H7M9 311 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 CISD1Q9NZ45 108 aaKnown RBP11.04□□□□□ -0.64
SHOX2-205ENST00000490689 M0R1X1 148 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 SIAH2O43255 324 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 CD33P20138 364 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 PMELP40967 661 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 CAMPP49913 170 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 FAM89BQ8N5H3 189 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 MSI2Q96DH6 328 aaKnown RBP11.04□□□□□ -0.64
SHOX2-205ENST00000490689 OCIAD1Q9NX40 245 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 OR1A1Q9P1Q5 309 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 ZNF391Q9UJN7 358 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 FZR1Q9UM11 496 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 CACNA1HO95180 2353 aa11.04□□□□□ -0.64
SHOX2-205ENST00000490689 IGKV1D-13A0A0B4J2D9 117 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 IGKV1-13P0DP09 117 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 WNT5AP41221 380 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 TBC1D28Q2M2D7 210 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 C10orf91Q5T1B1 145 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 OR5B3Q8NH48 314 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 SP7Q8TDD2 431 aaPredicted RBP11.03□□□□□ -0.64
SHOX2-205ENST00000490689 TM2D1Q9BX74 207 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 MRPL13Q9BYD1 178 aaKnown RBP11.03□□□□□ -0.64
SHOX2-205ENST00000490689 FBLN5Q9UBX5 448 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 COL4A6Q14031 1691 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 RRP8O43159 456 aaKnown RBP11.03□□□□□ -0.64
SHOX2-205ENST00000490689 SPEM2Q0P670 501 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 TMEM171Q8WVE6 324 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 EDARADDQ8WWZ3 215 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 TECTBQ96PL2 329 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 LRFN3Q9BTN0 628 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 NDUFAF3Q9BU61 184 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 AKIRIN1Q9H9L7 192 aaPredicted RBP11.03□□□□□ -0.64
SHOX2-205ENST00000490689 MANBALQ9NQG1 85 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 RNF24Q9Y225 148 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 IGKV3D-11A0A0A0MRZ8 115 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 NXPH1P58417 271 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 SPCS3P61009 180 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 C3AR1Q16581 482 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 HES3Q5TGS1 186 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 RNASEKQ6P5S7 137 aaKnown RBP11.03□□□□□ -0.64
SHOX2-205ENST00000490689 OR1L6Q8NGR2 347 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 RHBDD1Q8TEB9 315 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 SDF2L1Q9HCN8 221 aa11.03□□□□□ -0.64
SHOX2-205ENST00000490689 A0A087WWC5 75 aa11.02□□□□□ -0.64
SHOX2-205ENST00000490689 H0Y980 276 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms