RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 ELK1P19419 428 aa11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 DTYMKP23919 212 aa11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 CD24P25063 80 aa11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 ZNF137PP52743 207 aa11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 SRSF7Q16629 238 aaKnown RBP eCLIP11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 PNLIPRP3Q17RR3 467 aa11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 LY6G6FQ5SQ64 297 aa11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 STEAP3Q658P3 488 aa11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 ODF3L1Q8IXM7 274 aa11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 RPEQ96AT9 228 aa11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 PHF21AQ96BD5 680 aa11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 S100A16Q96FQ6 103 aaKnown RBP11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 ABHD14AQ9BUJ0 271 aa11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 DIABLOQ9NR28 239 aa11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 AMMECR1Q9Y4X0 333 aaPredicted RBP11.56□□□□□ -0.56
SRGAP3-208ENST00000490348 APOA1P02647 267 aa11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 TALDO1P37837 337 aa11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 CEACAM3P40198 252 aa11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 REG1BP48304 166 aa11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 TAS2R20P59543 309 aa11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 GNG2P59768 71 aa11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 TMEM219Q86XT9 240 aa11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 OR4A4PQ8NGN8 299 aa11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 CFHR4Q92496 578 aa11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 GCDHQ92947 438 aaPredicted RBP11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 TOMM40LQ969M1 308 aa11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 CMTM3Q96MX0 182 aa11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 CABLES2Q9BTV7 478 aa11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 ST6GALNAC5Q9BVH7 336 aa11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 IFI27L2Q9H2X8 130 aa11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 TCF19Q9Y242 345 aa11.55□□□□□ -0.56
SRGAP3-208ENST00000490348 A6NDX4 124 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 BTBD17A6NE02 478 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 OOSP1A8MZH6 123 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 HSD17B6O14756 317 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 TIMM23O14925 209 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 CEACAM6P40199 344 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 PITPNAQ00169 270 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 TMEM69Q5SWH9 247 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 GVQW1Q8N7I0 195 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 AP3S1Q92572 193 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 RBMXL1Q96E39 390 aaKnown RBP11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 AGMATQ9BSE5 352 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 C1RLQ9NZP8 487 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 CCDC59Q9P031 241 aaKnown RBP11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 TRBV6-7A0A0A0MS04 114 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 ST8SIA5O15466 376 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 HLA-DQB1P01920 261 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 HKR1P10072 659 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 ZBTB25P24278 435 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 KIR2DS4P43632 304 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 ACTG1P63261 375 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 ZNF816Q0VGE8 651 aaPredicted RBP11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 KIR2DS1Q14954 304 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 LYG1Q8N1E2 194 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 DRAM1Q8N682 238 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 OR2AK2Q8NG84 335 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 OR56B4Q8NH76 319 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 RTN4IP1Q8WWV3 396 aaPredicted RBP11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 SLIRPQ9GZT3 109 aaKnown RBP11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 TOLLIPQ9H0E2 274 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 C11orf54Q9H0W9 315 aaPredicted RBP11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 MIXL1Q9H2W2 232 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 ABCB10Q9NRK6 738 aa11.54□□□□□ -0.56
SRGAP3-208ENST00000490348 IGHV1-3A0A0C4DH29 117 aa11.53□□□□□ -0.56
SRGAP3-208ENST00000490348 TMEM89A2RUT3 159 aa11.53□□□□□ -0.56
SRGAP3-208ENST00000490348 FAM90A9PA6NNJ1 464 aa11.53□□□□□ -0.56
SRGAP3-208ENST00000490348 CTDSP2O14595 271 aa11.53□□□□□ -0.56
SRGAP3-208ENST00000490348 BET1O15155 118 aa11.53□□□□□ -0.56
SRGAP3-208ENST00000490348 NOL3O60936 208 aaKnown RBP11.53□□□□□ -0.56
SRGAP3-208ENST00000490348 RGS11O94810 467 aa11.53□□□□□ -0.56
SRGAP3-208ENST00000490348 OR3A3P47888 321 aa11.53□□□□□ -0.56
SRGAP3-208ENST00000490348 RAB7AP51149 207 aa11.53□□□□□ -0.56
SRGAP3-208ENST00000490348 HABP2Q14520 560 aaPredicted RBP11.53□□□□□ -0.56
SRGAP3-208ENST00000490348 CCDC144NLQ6NUI1 221 aa11.53□□□□□ -0.56
SRGAP3-208ENST00000490348 RDH8Q9NYR8 311 aa11.53□□□□□ -0.56
SRGAP3-208ENST00000490348 SAA2-SAA4A0A096LPE2 208 aa11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 MEIS3P1A6NDR6 274 aa11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 ITGB1BP1O14713 200 aa11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 HSPA12AO43301 675 aa11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 DIRAS3O95661 229 aa11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 FCER2P06734 321 aa11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 SAA2P0DJI9 122 aaPredicted RBP11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 SOX6P35712 828 aa11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 MNDAP41218 407 aa11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 RPL15P61313 204 aaKnown RBP11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 MZT2AQ6P582 158 aa11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 HOGA1Q86XE5 327 aa11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 LAX1Q8IWV1 398 aa11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 OR8H3Q8N146 312 aa11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 SNAPC3Q92966 411 aa11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 ZNF251Q9BRH9 671 aa11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 RSL24D1Q9UHA3 163 aaKnown RBP11.52□□□□□ -0.57
SRGAP3-208ENST00000490348 IGHV3-72A0A0B4J1Y9 119 aa11.51□□□□□ -0.57
SRGAP3-208ENST00000490348 A6NHS1 94 aa11.51□□□□□ -0.57
SRGAP3-208ENST00000490348 ZNF736B4DX44 427 aaPredicted RBP11.51□□□□□ -0.57
SRGAP3-208ENST00000490348 PROP1O75360 226 aa11.51□□□□□ -0.57
SRGAP3-208ENST00000490348 GAPDHP04406 335 aaKnown RBP11.51□□□□□ -0.57
SRGAP3-208ENST00000490348 COMPP49747 757 aaPredicted RBP11.51□□□□□ -0.57
SRGAP3-208ENST00000490348 RPL39P5Q59GN2 51 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms