RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 CA11O75493 328 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 SC5DO75845 299 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 CDRT1O95170 752 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 HBZP02008 142 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 CSTBP04080 98 aaKnown RBP6.26□□□□□ -1.41
USP39-216ENST00000490193 EGR2P11161 476 aaPredicted RBP6.26□□□□□ -1.41
USP39-216ENST00000490193 ARSBP15848 533 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 SNRPGP62308 76 aaKnown RBP6.26□□□□□ -1.41
USP39-216ENST00000490193 CX3CL1P78423 397 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 TMEM267Q0VDI3 215 aaPredicted RBP6.26□□□□□ -1.41
USP39-216ENST00000490193 ECSCRQ19T08 205 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 DNAL1Q4LDG9 190 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 MORN2Q502X0 79 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 AKIRIN2Q53H80 203 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 LY6G6FQ5SQ64 297 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 SYT6Q5T7P8 510 aaPredicted RBP6.26□□□□□ -1.41
USP39-216ENST00000490193 MEDAGQ5VYS4 303 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 LINC00322Q6ZN03 302 aaPredicted RBP6.26□□□□□ -1.41
USP39-216ENST00000490193 ZNF833PQ6ZTB9 187 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 ZNF554Q86TJ5 538 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 HAPLN4Q86UW8 402 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 SATL1Q86VE3 508 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 ANKRD13BQ86YJ7 626 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 STX19Q8N4C7 294 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 OR10V1Q8NGI7 309 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 NEK7Q8TDX7 302 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 TSEN15Q8WW01 171 aaKnown RBP6.26□□□□□ -1.41
USP39-216ENST00000490193 PDCD1LG2Q9BQ51 273 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 MRPL20Q9BYC9 149 aaKnown RBP6.26□□□□□ -1.41
USP39-216ENST00000490193 SLA2Q9H6Q3 261 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 SPACA1Q9HBV2 294 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 MBNL3Q9NUK0 354 aaKnown RBP6.26□□□□□ -1.41
USP39-216ENST00000490193 KIAA1456Q9P272 454 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 RNF150Q9ULK6 438 aa6.26□□□□□ -1.41
USP39-216ENST00000490193 E9PI62 339 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 H0Y980 276 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 RGS11O94810 467 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 CD2P06729 351 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 GTF2F2P13984 249 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 SERPINA2P20848 420 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 ZP3P21754 424 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 FASP25445 335 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 ZNF93P35789 620 aaPredicted RBP6.25□□□□□ -1.41
USP39-216ENST00000490193 ADARB1P78563 741 aaKnown RBP6.25□□□□□ -1.41
USP39-216ENST00000490193 HTD2P86397 168 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 LRRC36Q1X8D7 754 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 ATAD3CQ5T2N8 411 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 FAM71F2Q6NXP2 309 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 OR1L1Q8NH94 360 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 CASTOR1Q8WTX7 329 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 RGP1Q92546 391 aaPredicted RBP6.25□□□□□ -1.41
USP39-216ENST00000490193 TMEM106AQ96A25 262 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 MRPS24Q96EL2 167 aaKnown RBP6.25□□□□□ -1.41
USP39-216ENST00000490193 ABHD14AQ9BUJ0 271 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 ALG8Q9BVK2 526 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 HIPK2Q9H2X6 1198 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 ISG20L2Q9H9L3 353 aaKnown RBP6.25□□□□□ -1.41
USP39-216ENST00000490193 TMEM138Q9NPI0 162 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 IMPAD1Q9NX62 359 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 TAS2R4Q9NYW5 299 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 SIGLEC8Q9NYZ4 499 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 JPT1Q9UK76 154 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 TRAPPC2LQ9UL33 140 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 ING4Q9UNL4 249 aa6.25□□□□□ -1.41
USP39-216ENST00000490193 A0A1W2PP11 408 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 RBMY1BA6NDE4 496 aaKnown RBP6.24□□□□□ -1.41
USP39-216ENST00000490193 RBMY1EA6NEQ0 496 aaKnown RBP6.24□□□□□ -1.41
USP39-216ENST00000490193 SNTNA6NMZ2 147 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 MCRIP1C9JLW8 97 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 RRHO14718 337 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 GYG2O15488 501 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 YPEL1O60688 119 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 IGHV3-11P01762 117 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 TFAP2AP05549 437 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 GLAP06280 429 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 RBMY1DP0C7P1 496 aaKnown RBP6.24□□□□□ -1.41
USP39-216ENST00000490193 RCC1P18754 421 aaPredicted RBP6.24□□□□□ -1.41
USP39-216ENST00000490193 TPPP2P59282 170 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 KLF5Q13887 457 aaPredicted RBP6.24□□□□□ -1.41
USP39-216ENST00000490193 GPR176Q14439 515 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 GNMTQ14749 295 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 MOGAT2Q3SYC2 334 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 ACTBL2Q562R1 376 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 DDI2Q5TDH0 399 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 IL34Q6ZMJ4 242 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 LHFPL3Q86UP9 236 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 GTSCR1Q86UQ5 136 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 CCDC197Q8NCU1 140 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 OR9G4Q8NGQ1 327 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 OR4K15Q8NH41 348 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 GPR148Q8TDV2 347 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 LINC00476Q8WZB0 136 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 SLC7A6OSQ96CW6 309 aaPredicted RBP6.24□□□□□ -1.41
USP39-216ENST00000490193 LGALS12Q96DT0 336 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 FAM210AQ96ND0 272 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 YPEL2Q96QA6 119 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 S100A13Q99584 98 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 ARPC5LQ9BPX5 153 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 RSRP1Q9BUV0 290 aa6.24□□□□□ -1.41
USP39-216ENST00000490193 FBXL15Q9H469 300 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms