RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, human

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD9-208	ENST00000489816	ZNF883	P0CG24	379 aa		13.27	□□□□□ -0.28
BRD9-208	ENST00000489816	S100G	P29377	79 aa		13.27	□□□□□ -0.28
BRD9-208	ENST00000489816	OR8G1	Q15617	311 aa		13.27	□□□□□ -0.28
BRD9-208	ENST00000489816	TRIP6	Q15654	476 aa	Known RBP	13.27	□□□□□ -0.28
BRD9-208	ENST00000489816	DEFB124	Q8NES8	71 aa		13.27	□□□□□ -0.28
BRD9-208	ENST00000489816	MRGPRD	Q8TDS7	321 aa		13.27	□□□□□ -0.28
BRD9-208	ENST00000489816	PBDC1	Q9BVG4	233 aa		13.27	□□□□□ -0.28
BRD9-208	ENST00000489816	METRN	Q9UJH8	293 aa		13.27	□□□□□ -0.28
BRD9-208	ENST00000489816	RBMXL2	O75526	392 aa	Known RBP	13.27	□□□□□ -0.29
BRD9-208	ENST00000489816	CD55	P08174	381 aa		13.27	□□□□□ -0.29
BRD9-208	ENST00000489816	DEFA4	P12838	97 aa		13.27	□□□□□ -0.29
BRD9-208	ENST00000489816	GABRA2	P47869	451 aa		13.27	□□□□□ -0.29
BRD9-208	ENST00000489816	SLC16A13	Q7RTY0	426 aa		13.27	□□□□□ -0.29
BRD9-208	ENST00000489816	OR5D13	Q8NGL4	314 aa		13.27	□□□□□ -0.29
BRD9-208	ENST00000489816	FAM234A	Q9H0X4	552 aa		13.27	□□□□□ -0.29
BRD9-208	ENST00000489816	C1orf196	B1AJZ1	125 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	UCP2	P55851	309 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	EDDM3A	Q14507	147 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	BEND4	Q6ZU67	534 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	STX12	Q86Y82	276 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	KLF14	Q8TD94	323 aa	Predicted RBP	13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	NANOS1	Q8WY41	292 aa	Known RBP	13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	CEP295	Q9C0D2	2601 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	G6PC	P35575	357 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	ZNF585B	Q52M93	769 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	DRAM1	Q8N682	238 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	PLK3	Q9H4B4	646 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	GP6	Q9HCN6	339 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	TMEM9B	Q9NQ34	198 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	STRAP	Q9Y3F4	350 aa	Known RBP	13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	NQO2	P16083	231 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	RPL23A	P62750	156 aa	Known RBP	13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	ABHD14B	Q96IU4	210 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	OR2D2	Q9H210	308 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	ZNF665	Q9H7R5	613 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	PSENEN	Q9NZ42	101 aa		13.26	□□□□□ -0.29
BRD9-208	ENST00000489816	SSTR5	P35346	364 aa		13.25	□□□□□ -0.29
BRD9-208	ENST00000489816	TNFSF10	P50591	281 aa		13.25	□□□□□ -0.29
BRD9-208	ENST00000489816	RAB5B	P61020	215 aa		13.25	□□□□□ -0.29
BRD9-208	ENST00000489816	PLA2G2C	Q5R387	149 aa		13.25	□□□□□ -0.29
BRD9-208	ENST00000489816		Q6ZR03	302 aa		13.25	□□□□□ -0.29
BRD9-208	ENST00000489816	RPRM	Q9NS64	109 aa		13.25	□□□□□ -0.29
BRD9-208	ENST00000489816	KMT2E	Q8IZD2	1858 aa		13.25	□□□□□ -0.29
BRD9-208	ENST00000489816	APC2	O95996	2303 aa		13.25	□□□□□ -0.29
BRD9-208	ENST00000489816		H3BQ15	152 aa		13.25	□□□□□ -0.29
BRD9-208	ENST00000489816	SYNGR2	O43760	224 aa		13.25	□□□□□ -0.29
BRD9-208	ENST00000489816	PTAFR	P25105	342 aa		13.25	□□□□□ -0.29
BRD9-208	ENST00000489816	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.25	□□□□□ -0.29
BRD9-208	ENST00000489816	IQCF2	Q8IXL9	164 aa		13.25	□□□□□ -0.29
BRD9-208	ENST00000489816	DUSP13	Q9UII6	198 aa		13.25	□□□□□ -0.29
BRD9-208	ENST00000489816	CLDN1	O95832	211 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	IL2RG	P31785	369 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	TAGLN2	P37802	199 aa	Known RBP	13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	RAB5C	P51148	216 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	VHLL	Q6RSH7	139 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816		Q6ZS49	121 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	LILRB2	Q8N423	598 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	MLNR	O43193	412 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	OR2C1	O95371	312 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	HAND1	O96004	215 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	IFNA5	P01569	189 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	HEXA	P06865	529 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	RAB11A	P62491	216 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	RPL30	P62888	115 aa	Known RBP	13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	TGFBR3	Q03167	851 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	SSX7	Q7RTT5	188 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	FGFRL1	Q8N441	504 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	TMEM178A	Q8NBL3	297 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	RIMS4	Q9H426	269 aa	Predicted RBP	13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	ZNF292	O60281	2723 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	SH2D1B	O14796	132 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	RPS10	P46783	165 aa	Known RBP	13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	GLIPR1	P48060	266 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	FABP9	Q0Z7S8	132 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	MRPL49	Q13405	166 aa	Known RBP	13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	RAB39B	Q96DA2	213 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	ATP5S	Q99766	215 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	CLN8	Q9UBY8	286 aa		13.24	□□□□□ -0.29
BRD9-208	ENST00000489816	UBE2L5P	A0A1B0GUS4	154 aa		13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	ZNF806	P0C7X5	589 aa		13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	UBE2K	P61086	200 aa		13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	NCMAP	Q5T1S8	102 aa		13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	ZNF497	Q6ZNH5	498 aa		13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	HAPLN4	Q86UW8	402 aa		13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	C9orf106	Q8NAJ2	232 aa		13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	NANP	Q8TBE9	248 aa		13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	SCGB1C1	Q8TD33	95 aa		13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	GTF3A	Q92664	365 aa	Known RBP	13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	WSB1	Q9Y6I7	421 aa		13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	TACC2	O95359	2948 aa		13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	OR5H1	A6NKK0	313 aa		13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	TIMM8A	O60220	97 aa	Predicted RBP	13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	RAB5A	P20339	215 aa		13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	BMP5	P22003	454 aa		13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	RPS23	P62266	143 aa	Known RBP	13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	TREM2	Q9NZC2	230 aa		13.23	□□□□□ -0.29
BRD9-208	ENST00000489816	LRP5L	A4QPB2	252 aa		13.22	□□□□□ -0.29
BRD9-208	ENST00000489816	C12orf77	C9JDV5	145 aa		13.22	□□□□□ -0.29
BRD9-208	ENST00000489816	SSX9	Q7RTT3	188 aa		13.22	□□□□□ -0.29
BRD9-208	ENST00000489816	C15orf54	Q8N8G6	183 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms