RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 ZBTB25P24278 435 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 CDKN1AP38936 164 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 P2RX3P56373 397 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 PAX5Q02548 391 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 SRSF1Q07955 248 aaKnown RBP eCLIP6.41□□□□□ -1.38
SMC6-209ENST00000489535 PPP1R1AQ13522 171 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 ABCA11PQ4W5N1 156 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 TRAT1Q6PIZ9 186 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 LYPD2Q6UXB3 125 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 LYG2Q86SG7 212 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 H1FOOQ8IZA3 346 aaPredicted RBP6.41□□□□□ -1.38
SMC6-209ENST00000489535 MUC20Q8N307 709 aaPredicted RBP6.41□□□□□ -1.38
SMC6-209ENST00000489535 FGFRL1Q8N441 504 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 UXS1Q8NBZ7 420 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 OR11H7Q8NGC8 314 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 OR1L1Q8NH94 360 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 ZFAND1Q8TCF1 268 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 SECTM1Q8WVN6 248 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 TMEM230Q96A57 120 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 ST6GAL2Q96JF0 529 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 LURAP1Q96LR2 239 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 RTBDNQ9BSG5 229 aaPredicted RBP6.41□□□□□ -1.38
SMC6-209ENST00000489535 DCTN5Q9BTE1 182 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 FAM234AQ9H0X4 552 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 RANGRFQ9HD47 186 aaPredicted RBP6.41□□□□□ -1.38
SMC6-209ENST00000489535 OR1A1Q9P1Q5 309 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 MGAT4CQ9UBM8 478 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 SLC23A1Q9UHI7 598 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 USF3Q68DE3 2245 aa6.41□□□□□ -1.38
SMC6-209ENST00000489535 IGHV3-43A0A0B4J1X8 118 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 C9orf170A2RU37 121 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 NPIPB11E5RHQ5 1161 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 HSPA12AO43301 675 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 TUSC2O75896 110 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 LY6HO94772 140 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 SFT2D2O95562 160 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 HBZP02008 142 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 IGHV3-43DP0DP04 118 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 NDUFB7P17568 137 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 VAMP1P23763 118 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 CD34P28906 385 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 ERP29P30040 261 aaKnown RBP6.4□□□□□ -1.38
SMC6-209ENST00000489535 IL2RGP31785 369 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 SSTR5P35346 364 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 UCP3P55916 312 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 DHODHQ02127 395 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 TLE4Q04727 773 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 DHRS2Q13268 280 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 SLC9A3R2Q15599 337 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 KCNJ8Q15842 424 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 TMEM128Q5BJH2 165 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 LPCAT3Q6P1A2 487 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 FAHD2BQ6P2I3 314 aaPredicted RBP6.4□□□□□ -1.38
SMC6-209ENST00000489535 SLC38A6Q8IZM9 456 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 C12orf45Q8N5I9 185 aaPredicted RBP6.4□□□□□ -1.38
SMC6-209ENST00000489535 ZNF565Q8N9K5 539 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 CCDC71LQ8N9Z2 235 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 OR2AK2Q8NG84 335 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 CASTOR1Q8WTX7 329 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 ARL11Q969Q4 196 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 GALMQ96C23 342 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 C14orf79Q96F83 325 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 FAHD2AQ96GK7 314 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 FYTTD1Q96QD9 318 aaKnown RBP6.4□□□□□ -1.38
SMC6-209ENST00000489535 TMEM246Q9BRR3 403 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 SLC5A7Q9GZV3 580 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 SLC25A10Q9UBX3 287 aaPredicted RBP6.4□□□□□ -1.38
SMC6-209ENST00000489535 OR2W1Q9Y3N9 320 aa6.4□□□□□ -1.38
SMC6-209ENST00000489535 TRGV10A0A0A0MS01 117 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 IGKV1D-13A0A0B4J2D9 117 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 CRYM-AS1A6NIL9 109 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 GOSR2O14653 212 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 HSD17B6O14756 317 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 TNFRSF13BO14836 293 aaPredicted RBP6.39□□□□□ -1.39
SMC6-209ENST00000489535 SPINT2O43291 252 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 NDUFB3O43676 98 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 NDUFA2O43678 99 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 RP2O75695 350 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 SLC22A5O76082 557 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 IGHV2-70P01814 119 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 IGKV1-13P0DP09 117 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 ANXA3P12429 323 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 DAOP14920 347 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 CXCL3P19876 107 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 CEACAM6P40199 344 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 PIGPP57054 158 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 LTC4SQ16873 150 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 C2orf68Q2NKX9 166 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 PHLDA2Q53GA4 152 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 LRRC10Q5BKY1 277 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 AVPI1Q5T686 147 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 LIN54Q6MZP7 749 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 SGPP2Q8IWX5 399 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 SPICQ8N5J4 248 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 OR52L2PQ8NGH6 319 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 OR10V1Q8NGI7 309 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 RFESDQ8TAC1 157 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 H1FXQ92522 213 aaKnown RBP6.39□□□□□ -1.39
SMC6-209ENST00000489535 NINJ1Q92982 152 aa6.39□□□□□ -1.39
SMC6-209ENST00000489535 ZNF486Q96H40 463 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms