RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 TMEM225BP0DP42 221 aa10.98□□□□□ -0.65
UFD1-209ENST00000489406 HLA-DMBP28068 263 aa10.98□□□□□ -0.65
UFD1-209ENST00000489406 FXYD3Q14802 87 aa10.98□□□□□ -0.65
UFD1-209ENST00000489406 LINC00596Q86U02 117 aa10.98□□□□□ -0.65
UFD1-209ENST00000489406 SUMF2Q8NBJ7 301 aa10.98□□□□□ -0.65
UFD1-209ENST00000489406 SPSB1Q96BD6 273 aa10.98□□□□□ -0.65
UFD1-209ENST00000489406 C10orf35Q96D05 121 aa10.98□□□□□ -0.65
UFD1-209ENST00000489406 HLA-AP01891 365 aaKnown RBP10.97□□□□□ -0.65
UFD1-209ENST00000489406 GSTP1P09211 210 aaKnown RBP10.97□□□□□ -0.65
UFD1-209ENST00000489406 STEAP3Q658P3 488 aa10.97□□□□□ -0.65
UFD1-209ENST00000489406 Q6ZTC4 211 aa10.97□□□□□ -0.65
UFD1-209ENST00000489406 UTS2BQ765I0 119 aa10.97□□□□□ -0.65
UFD1-209ENST00000489406 PRR18Q8N4B5 295 aa10.97□□□□□ -0.65
UFD1-209ENST00000489406 OR2C3Q8N628 320 aa10.97□□□□□ -0.65
UFD1-209ENST00000489406 CCDC54Q8NEL0 328 aa10.97□□□□□ -0.65
UFD1-209ENST00000489406 OR4A5Q8NH83 315 aa10.97□□□□□ -0.65
UFD1-209ENST00000489406 FGGYQ96C11 551 aa10.97□□□□□ -0.65
UFD1-209ENST00000489406 COA4Q9NYJ1 87 aa10.97□□□□□ -0.65
UFD1-209ENST00000489406 AGRNO00468 2067 aa10.96□□□□□ -0.65
UFD1-209ENST00000489406 LOC107986453A0A1B0GWG9 222 aa10.96□□□□□ -0.65
UFD1-209ENST00000489406 DBTP11182 482 aaKnown RBP10.96□□□□□ -0.65
UFD1-209ENST00000489406 LGALS7P47929 136 aa10.96□□□□□ -0.65
UFD1-209ENST00000489406 ZSCAN26Q16670 478 aa10.96□□□□□ -0.65
UFD1-209ENST00000489406 PIGYQ3MUY2 71 aa10.96□□□□□ -0.65
UFD1-209ENST00000489406 ZNF833PQ6ZTB9 187 aa10.96□□□□□ -0.65
UFD1-209ENST00000489406 UXS1Q8NBZ7 420 aa10.96□□□□□ -0.65
UFD1-209ENST00000489406 KCNG3Q8TAE7 436 aa10.96□□□□□ -0.65
UFD1-209ENST00000489406 MRPS24Q96EL2 167 aaKnown RBP10.96□□□□□ -0.65
UFD1-209ENST00000489406 MAGEL2Q9UJ55 1249 aa10.96□□□□□ -0.65
UFD1-209ENST00000489406 ING4Q9UNL4 249 aa10.96□□□□□ -0.65
UFD1-209ENST00000489406 VPS13BQ7Z7G8 4022 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 PPP5D1E7EU14 171 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 SLC22A1O15245 554 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 SPINT2O43291 252 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 GMNNO75496 209 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 FADS2O95864 444 aaKnown RBP10.95□□□□□ -0.66
UFD1-209ENST00000489406 EXOSC2Q13868 293 aaKnown RBP10.95□□□□□ -0.66
UFD1-209ENST00000489406 IL13RA2Q14627 380 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 GINS1Q14691 196 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 PSG5Q15238 335 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 SPATS1Q496A3 300 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 BTNL8Q6UX41 500 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 RBPMS2Q6ZRY4 209 aaKnown RBP10.95□□□□□ -0.66
UFD1-209ENST00000489406 UBE2DNLQ8IWF7 75 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 SLC38A6Q8IZM9 456 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 OR1L1Q8NH94 360 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 GHSRQ92847 366 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 TLCD1Q96CP7 247 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 GALNT14Q96FL9 552 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 NIPSNAP1Q9BPW8 284 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 HOPXQ9BPY8 73 aaPredicted RBP10.95□□□□□ -0.66
UFD1-209ENST00000489406 ABHD14AQ9BUJ0 271 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 HRH4Q9H3N8 390 aa10.95□□□□□ -0.66
UFD1-209ENST00000489406 RCC2Q9P258 522 aaKnown RBP10.95□□□□□ -0.66
UFD1-209ENST00000489406 CCDC182A6NF36 153 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 S1PR2O95136 353 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 OR2C1O95371 312 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 HBZP02008 142 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 AMBPP02760 352 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 MT-ND4P03905 459 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 SCTP09683 121 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 ZNF20P17024 532 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 MED22Q15528 200 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 MORN2Q502X0 79 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 Q5VSD8 79 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 ELP2Q6IA86 826 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 GLDNQ6ZMI3 551 aaPredicted RBP10.94□□□□□ -0.66
UFD1-209ENST00000489406 SPATA12Q7Z6I5 190 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 OR13C9Q8NGT0 318 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 OR10AC1Q8NH08 325 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 OR5B3Q8NH48 314 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 CNN2Q99439 309 aaKnown RBP10.94□□□□□ -0.66
UFD1-209ENST00000489406 CSTL1Q9H114 145 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 SAR1AQ9NR31 198 aa10.94□□□□□ -0.66
UFD1-209ENST00000489406 ZNF230Q9UIE0 474 aaPredicted RBP10.94□□□□□ -0.66
UFD1-209ENST00000489406 SAA2-SAA4A0A096LPE2 208 aa10.93□□□□□ -0.66
UFD1-209ENST00000489406 TMEM213A2RRL7 107 aa10.93□□□□□ -0.66
UFD1-209ENST00000489406 MPTX1A8MV57 137 aa10.93□□□□□ -0.66
UFD1-209ENST00000489406 H7C2Y5 167 aa10.93□□□□□ -0.66
UFD1-209ENST00000489406 AIPO00170 330 aa10.93□□□□□ -0.66
UFD1-209ENST00000489406 IFNA21P01568 189 aa10.93□□□□□ -0.66
UFD1-209ENST00000489406 IFNA17P01571 189 aa10.93□□□□□ -0.66
UFD1-209ENST00000489406 SAA2P0DJI9 122 aaPredicted RBP10.93□□□□□ -0.66
UFD1-209ENST00000489406 APELAP0DMC3 54 aa10.93□□□□□ -0.66
UFD1-209ENST00000489406 ADARB1P78563 741 aaKnown RBP10.93□□□□□ -0.66
UFD1-209ENST00000489406 ALKBH1Q13686 389 aaKnown RBP10.93□□□□□ -0.66
UFD1-209ENST00000489406 GNMTQ14749 295 aa10.93□□□□□ -0.66
UFD1-209ENST00000489406 SLC35F2Q8IXU6 374 aa10.93□□□□□ -0.66
UFD1-209ENST00000489406 PRSS35Q8N3Z0 413 aa10.93□□□□□ -0.66
UFD1-209ENST00000489406 OR10K1Q8NGX5 313 aa10.93□□□□□ -0.66
UFD1-209ENST00000489406 NDUFAF3Q9BU61 184 aa10.93□□□□□ -0.66
UFD1-209ENST00000489406 AKIP1Q9NQ31 210 aa10.93□□□□□ -0.66
UFD1-209ENST00000489406 OR2S2Q9NQN1 319 aa10.93□□□□□ -0.66
UFD1-209ENST00000489406 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.92□□□□□ -0.66
UFD1-209ENST00000489406 TRAV25A0A0B4J276 109 aa10.92□□□□□ -0.66
UFD1-209ENST00000489406 HTR3BO95264 441 aa10.92□□□□□ -0.66
UFD1-209ENST00000489406 HMGN1P05114 100 aa10.92□□□□□ -0.66
UFD1-209ENST00000489406 SSBP2P81877 361 aaPredicted RBP10.92□□□□□ -0.66
UFD1-209ENST00000489406 TMEM30BQ3MIR4 351 aa10.92□□□□□ -0.66
UFD1-209ENST00000489406 ODF3L2Q3SX64 289 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms