RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 MOB3AQ96BX8 217 aa9.07□□□□□ -0.96
COL21A1-211ENST00000488912 ALX4Q9H161 411 aaPredicted RBP9.07□□□□□ -0.96
COL21A1-211ENST00000488912 OR51M1Q9H341 326 aa9.07□□□□□ -0.96
COL21A1-211ENST00000488912 KCNIP1Q9NZI2 227 aa9.07□□□□□ -0.96
COL21A1-211ENST00000488912 PIPOXQ9P0Z9 390 aa9.07□□□□□ -0.96
COL21A1-211ENST00000488912 CTSZQ9UBR2 303 aa9.07□□□□□ -0.96
COL21A1-211ENST00000488912 PCDHB10Q9UN67 800 aa9.07□□□□□ -0.96
COL21A1-211ENST00000488912 USP9YO00507 2555 aaPredicted RBP9.07□□□□□ -0.96
COL21A1-211ENST00000488912 TACC2O95359 2948 aa9.07□□□□□ -0.96
COL21A1-211ENST00000488912 YLPM1P49750 1951 aaKnown RBP9.07□□□□□ -0.96
COL21A1-211ENST00000488912 ADAM20O43506 726 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 S100A8P05109 93 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 PGAM2P15259 253 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 MRPS11P82912 194 aaKnown RBP9.06□□□□□ -0.96
COL21A1-211ENST00000488912 SURF2Q15527 256 aaPredicted RBP9.06□□□□□ -0.96
COL21A1-211ENST00000488912 AVPI1Q5T686 147 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 SLC25A42Q86VD7 318 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 OR10J5Q8NHC4 309 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 NANPQ8TBE9 248 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 RTBDNQ9BSG5 229 aaPredicted RBP9.06□□□□□ -0.96
COL21A1-211ENST00000488912 NKX6-2Q9C056 277 aaPredicted RBP9.06□□□□□ -0.96
COL21A1-211ENST00000488912 SLC25A10Q9UBX3 287 aaPredicted RBP9.06□□□□□ -0.96
COL21A1-211ENST00000488912 ZNF69Q9UC07 566 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 TUSC2O75896 110 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 IGHV2-70P01814 119 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 HBZP02008 142 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 APOC3P02656 99 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 COX6B1P14854 86 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 AKR1C4P17516 323 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 S100PP25815 95 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 HERV-K104P61576 105 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 ZNF626Q68DY1 528 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 SP5Q6BEB4 398 aaPredicted RBP9.06□□□□□ -0.96
COL21A1-211ENST00000488912 H1FOOQ8IZA3 346 aaPredicted RBP9.06□□□□□ -0.96
COL21A1-211ENST00000488912 TMEM230Q96A57 120 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 LURAP1Q96LR2 239 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 SCGB3A2Q96PL1 93 aa9.06□□□□□ -0.96
COL21A1-211ENST00000488912 GPN1Q9HCN4 374 aaPredicted RBP9.06□□□□□ -0.96
COL21A1-211ENST00000488912 DOPEY2Q9Y3R5 2298 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 IGKV1D-13A0A0B4J2D9 117 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 NPIPB11E5RHQ5 1161 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 C15orf65H3BRN8 121 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 J3QKU1 62 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 OVOL3O00110 214 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 SSNA1O43805 119 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 CREBL2O60519 120 aaPredicted RBP9.05□□□□□ -0.96
COL21A1-211ENST00000488912 EIF3GO75821 320 aaKnown RBP eCLIP9.05□□□□□ -0.96
COL21A1-211ENST00000488912 ZNF728P0DKX0 622 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 IGKV1-13P0DP09 117 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 NDUFB7P17568 137 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 ECI1P42126 302 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 RELQ04864 619 aaPredicted RBP9.05□□□□□ -0.96
COL21A1-211ENST00000488912 DHRS2Q13268 280 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 PPP1R1AQ13522 171 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 TCF23Q7RTU1 214 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 MUC20Q8N307 709 aaPredicted RBP9.05□□□□□ -0.96
COL21A1-211ENST00000488912 OR1S1Q8NH92 325 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 RFESDQ8TAC1 157 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 ARL11Q969Q4 196 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 GALMQ96C23 342 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 C14orf79Q96F83 325 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 KAAG1Q9UBP8 84 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 SPG11Q96JI7 2443 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 SNRPGP15A8MWD9 76 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 WRBO00258 174 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 HSPA12AO43301 675 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 FSTL3O95633 263 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 DIRAS3O95661 229 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 HLA-AP01891 365 aaKnown RBP9.05□□□□□ -0.96
COL21A1-211ENST00000488912 IL2RGP31785 369 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 UBE2MP61081 183 aaKnown RBP9.05□□□□□ -0.96
COL21A1-211ENST00000488912 CR1LQ2VPA4 569 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 FAM53AQ6NSI3 398 aaPredicted RBP9.05□□□□□ -0.96
COL21A1-211ENST00000488912 TRAT1Q6PIZ9 186 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 LDLRAD3Q86YD5 345 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 ZNF565Q8N9K5 539 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 IGFBPL1Q8WX77 278 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 PARP12Q9H0J9 701 aaKnown RBP9.05□□□□□ -0.96
COL21A1-211ENST00000488912 PPP1R14DQ9NXH3 145 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 OR6C3Q9NZP0 311 aa9.05□□□□□ -0.96
COL21A1-211ENST00000488912 C14orf166Q9Y224 244 aaKnown RBP9.05□□□□□ -0.96
COL21A1-211ENST00000488912 DVL1O14640 695 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 PPIHO43447 177 aaKnown RBP9.04□□□□□ -0.96
COL21A1-211ENST00000488912 F12P00748 615 aaPredicted RBP9.04□□□□□ -0.96
COL21A1-211ENST00000488912 RLN2P04090 185 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 HEXAP06865 529 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 CTSDP07339 412 aaPredicted RBP9.04□□□□□ -0.96
COL21A1-211ENST00000488912 ZBTB25P24278 435 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 TAS2R31P59538 309 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 GNMTQ14749 295 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 TMEM128Q5BJH2 165 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 FAHD2BQ6P2I3 314 aaPredicted RBP9.04□□□□□ -0.96
COL21A1-211ENST00000488912 PDZD9Q8IXQ8 264 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 SPICQ8N5J4 248 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 OR52L2PQ8NGH6 319 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 SECTM1Q8WVN6 248 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 FAHD2AQ96GK7 314 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 NCOR1P1Q9H4R4 102 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 CHODLQ9H9P2 273 aa9.04□□□□□ -0.96
COL21A1-211ENST00000488912 C19orf12Q9NSK7 152 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms